Yersinia pestis CO92 (biovar Orientalis): YPO1558
Help
Entry
YPO1558 CDS
T00063
Symbol
cpeA
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Pathway
ype03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YPO1558 (cpeA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ype03400
]
YPO1558 (cpeA)
Enzymes [BR:
ype01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
YPO1558 (cpeA)
DNA repair and recombination proteins [BR:
ype03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YPO1558 (cpeA)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YPO1558 (cpeA)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
YPO1558 (cpeA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
YkoP
Motif
Other DBs
NCBI-ProteinID:
CAL20203
UniProt:
A0A380PKI1
LinkDB
All DBs
Position
complement(1773897..1775327)
Genome browser
AA seq
476 aa
AA seq
DB search
MSDKNKQPTFYVHDYETFGQRPALDRPAQFAGVRTDLDFNLVEEPLVIYCKPADDYLPQP
EAVMITGITPQHALANGVNEAEFSRQIHQAFSVPGTCILGYNNIRFDDEVSRNIFYRNFY
DPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANGVEHLQAH
DAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSGMFGAARG
NTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQESAIPIKL
VHINKCPVLAPAKTLLPENADRLGIDRQRCLQNLQLLRQNPQVREKVVALFAQAEPFAVT
DDVDTQLYNGFFSDADRATIKIIQQTESQNLPALDLTFQDPRLEALLFRFRARNYPNTLN
DSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYEDDKEKLALLKALFEYAKGLVS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaaataagcaaccaacattttacgtccacgattatgaaaccttcggccag
cggccagccttggatagacctgcgcaatttgccggggtacgtaccgatctggatttcaat
ctcgtcgaagagccattggtcatttactgcaagcccgcagatgattatctgccacagccc
gaagcggtgatgataaccggtattaccccccaacatgctttagccaacggggtcaatgaa
gctgagttttcccgccaaatacaccaggccttttcggtacccggcacctgtatcctcggc
tacaacaatattcgttttgatgatgaagtcagtcgcaacattttctatcgtaatttttat
gatccttatgcctacagttggcaggggggaaattcccgttgggatctgttggatgtgatg
cgcgcctgctatgccctgcgcccagaaggtattgtttggcccgaaaatgatgatggcctg
cccagctttaaactggaacatttgaccaaagccaatggcgtcgaacatttacaggcacat
gatgcgatgtccgatgtctacgccaccattgcaatggcaaaattggtgaaacaggcccaa
ccccgtctgtttgattatctgtatcagcaccgcagtaagcataagatcaatgcgttgatt
gatatcgcggagatgacaccactggttcatgtgtctggcatgtttggtgccgcacggggc
aacaccagttgggtggcaccgctggcctggcaccccgagaataaaaatgcggtaattatg
tgtgatctggccggggatatgtccccattactggagttggacagcgatacattgcgcgaa
cgtctgtatacccgccgtgacaagctccaagcccaagagtcggcaatccctatcaaactg
gtacatatcaataaatgtccggtattggctcccgcgaaaaccctgctgcccgagaatgct
gatcgcttggggattgatcgccagcgttgtttgcaaaatctacaactgctgcggcaaaac
ccacaggtgcgtgaaaaagtggtcgcgctgtttgcacaagctgagccattcgcggttacc
gatgatgtggatacacagttgtataacggctttttcagtgatgctgatcgcgccaccata
aagattatccagcaaactgagtcacaaaatctgccagcactggatttgacatttcaggac
ccacggttggaggccctgttattccgcttccgcgcccgtaactacccgaataccttgaat
gacagtgaacaacagcgttggttacagcatcgccgtgaagcgcttagccctgaacgggta
caagattatgttttgcaactggaacaattttataaccagtatgaagacgataaagagaaa
cttgcgctgctaaaagcgttgtttgaatatgccaagggattagtgagttaa
DBGET
integrated database retrieval system
