Yersinia pestis CO92 (biovar Orientalis): YPO1640
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Entry
YPO1640 CDS
T00063
Symbol
ymfC
Name
(GenBank) putative pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ype03009
]
YPO1640 (ymfC)
Enzymes [BR:
ype01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
YPO1640 (ymfC)
Ribosome biogenesis [BR:
ype03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YPO1640 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAL20285
UniProt:
Q8ZFQ3
LinkDB
All DBs
Position
complement(1865466..1866092)
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AA seq
208 aa
AA seq
DB search
MNKFSVKNHKVNRFSTKAQARQSPPAAPRRVLLFNKPFDVLPQFTDESGRTTLQGFIPFK
DVYAAGRLDRDSEGLLVLTNDGKLQARLTQPAQKTGKVYFVQVEGVPDNDALTQLKRGVT
LKDGLTLPAGAELVAEPEWLWPRHPPIRERKTIPTSWLKITLYEGRNRQVRRMTAHVGFP
TLRLIRFSMGNLSLGNLQPGEWKEITDV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattctctgttaaaaatcacaaagttaaccgattcagcactaaggcacaagcc
aggcagtccccccccgctgcgccacggcgggtattgttattcaataaaccttttgatgta
ttaccgcaattcactgatgagtctggacgcaccactttgcagggtttcatcccttttaag
gacgtttatgctgctggccggttagatcgcgatagcgagggcttattggtattaaccaat
gatggcaagttgcaagccaggctcacgcaaccggcgcaaaaaacaggtaaagtctatttt
gtacaagtagaaggggtccctgacaacgatgcgctcacacagctaaaacgaggcgtaacg
ttgaaagatggcctgacgttacccgcaggcgcggagttagtggcagagcctgagtggcta
tggccgcgccatccccctatcagagagcgtaaaaccatcccgaccagttggttgaaaata
acactttatgaaggccgcaaccggcaagtacgtagaatgaccgcacacgttggcttccct
accctgcgcctgattcgttttagtatgggaaatttaagccttggcaacttacagcccggc
gaatggaaggagataactgatgtttaa
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integrated database retrieval system
