Yersinia pestis CO92 (biovar Orientalis): YPO2075
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Entry
YPO2075 CDS
T00063
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ype03016
]
YPO2075 (rnd)
Enzymes [BR:
ype01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
YPO2075 (rnd)
Transfer RNA biogenesis [BR:
ype03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
YPO2075 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAL20710
UniProt:
A0A5P8YMY3
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All DBs
Position
2356340..2357461
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AA seq
373 aa
AA seq
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MNYQLITTNNALQQVCEQARTHAHIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
TEWQPFRALLQDLNVVKYLHAGSEDLEVFLNAFDQMPTPMIDTQVLAAFSGRSLSCGFAM
LVAEFEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLAAKLVEATEAAGRMDAAK
DECLLLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLAEWRLRQARERDLAVNFVVR
EEHLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPEDQLPPPIANLIDQ
PGYKKVFKDIKALIQSVSERSGLSSELLASRRQINQLLNWHWKLKLSDAQPELLTGWRGD
LLSSELLEILQHY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcacgaccaataacgcattgcaacaggtctgcgaacaagcccgg
acacatgctcacatcgcgttggatacagagtttgtcagaacgcgcacttactaccctcag
ttgggtttgattcaactgtatgatggtgaacaactctcacttatagatccattacctatc
acggaatggcagccttttcgcgcgttactgcaagatctgaatgtggtgaaatatttacac
gcaggcagtgaagatctcgaagtgtttttaaacgcttttgaccagatgccaaccccgatg
attgatactcaggtattagcggcattttctggccgtagcctatcctgcggctttgccatg
ctggtggctgagtttgaaggtgttgagttagataaaagtgaatcacgtacagactggatt
gcccggccgttgagtgaaaaacagtgcgattatgcggcggctgatgtgttttatctttta
cctctggcggctaaattagtcgaagccactgaggcggcagggcggatggacgcggcgaaa
gacgaatgtctattgctgtgccgccgtcggagtgagacgctcgatcctgaactggcttac
cgtgagattaccaatgcctggcaactccgtggccatcaactggcatgtttgcagaaatta
gccgaatggcgtttacgtcaggcacgggagcgggatttggcggttaactttgtggttagg
gaagagcacctgtggcaagttgcccgctatcaaccaacatcactcggtgagttagattct
cttggcttgagtgggcaggagatccgctatcacgggcgaacattgctggcactggtcgcc
gaagggaatgccgtccctgaagatcagcttcctcccccgattgctaacttgattgaccaa
ccggggtacaaaaaagtctttaaagatattaaagccttgattcaatcggtcagtgaacgt
agcggattaagcagtgaattactggcatcacgtcgccaaattaatcagttactcaattgg
cactggaagttgaagctttcagatgctcaacctgaattattaacaggctggcgtggcgat
ttattgtcttctgaattgcttgaaatcttacaacactattaa
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