Yersinia pestis CO92 (biovar Orientalis): YPO2907
Help
Entry
YPO2907 CDS
T00063
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Pathway
ype00260
Glycine, serine and threonine metabolism
ype00460
Cyanoamino acid metabolism
ype00630
Glyoxylate and dicarboxylate metabolism
ype00670
One carbon pool by folate
ype00680
Methane metabolism
ype01100
Metabolic pathways
ype01110
Biosynthesis of secondary metabolites
ype01120
Microbial metabolism in diverse environments
ype01200
Carbon metabolism
ype01230
Biosynthesis of amino acids
ype01240
Biosynthesis of cofactors
ype04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YPO2907 (glyA)
09102 Energy metabolism
00680 Methane metabolism
YPO2907 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YPO2907 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YPO2907 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YPO2907 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
YPO2907 (glyA)
Enzymes [BR:
ype01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YPO2907 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CAL21518
UniProt:
Q8ZCR1
LinkDB
All DBs
Position
complement(3249072..3250325)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKALFGADYANVQPHSGSQANVAVYSALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGQIDYEDLARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIDAWFFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPGNQGGPLMHVIAGKAVALKEAMEPEFKIYQQQVAKNAKAMVA
VFLERGYKVVSGGTDNHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEAESRELAGWMCDVLDNINDEATIERVKQKVLAICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattacgatgcagatctgtggcgtgcaatggag
caagaagtcgtgcgtcaggaagaacacatcgaactgattgcgtctgagaactacaccagc
ccgcgtgttatgcaagcgcagggatctcagttaacgaacaaatatgctgaaggctatcca
ggcaagcgttattacggtggctgtgaatatgttgatgttgttgaacaattggcaatcgat
cgcgctaaagcattatttggtgctgattacgcaaacgttcaacctcattctggttcgcaa
gctaacgttgctgtttactccgcgctgctgaaacccggtgacaccgtattggggatgaat
ctggcacacggcggtcacttgacgcatggttcaccagtgaacttctccggcaaactctac
aacatcgtcccttatggtattgatgagtcgggtcaaattgattatgaagatctggcacgt
caggcagaaatacataaacccaaaatgattatcggtggcttctccgcctattctggtatc
gttgattgggcaaaaatgcgtgaaattgccgacagcattgacgcatggttctttgttgat
atggctcatgttgctggtctggttgctgcgggggtttatcctaacccggttccacatgcc
cacatcgttaccaccacgacgcacaagactctggctggcccacgtggcggtttgattctg
gcgaaagggggcgatgaagacttgtacaaaaaactgaactcttctgttttccctggtaac
cagggtggcccattgatgcatgttatcgcaggtaaagcggtcgcgctgaaagaagcaatg
gaacctgagtttaaaatttaccaacagcaagtggctaaaaatgcgaaagccatggtggcg
gtgttcttggagcgcggttacaaagtggtttctggtggtacggataaccacctgttcttg
ctagatttggtggataaagacatcaccggtaaagacgctgatgcggctttaggccgtgcg
aatatcaccgtgaacaaaaacagcgtacctaacgatccgaagagcccgtttgtgacatct
ggtgtgcgtattggtagcccagcgatcacccgccgtggcttcaaagaagcggaatcccgt
gaattggctggctggatgtgtgatgtgttagataacatcaacgatgaagcgaccattgag
cgtgtgaaacagaaagttctggctatctgcgctcgtttaccggtttacgcataa
DBGET
integrated database retrieval system
