Yersinia pestis CO92 (biovar Orientalis): YPO3399
Help
Entry
YPO3399 CDS
T00063
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Pathway
ype03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YPO3399 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ype03019
]
YPO3399 (pcnB)
Enzymes [BR:
ype01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
YPO3399 (pcnB)
Messenger RNA biogenesis [BR:
ype03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
YPO3399 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAL21988
UniProt:
Q0WBP7
LinkDB
All DBs
Position
3797123..3798445
Genome browser
AA seq
440 aa
AA seq
DB search
MAIIPRDQHNISRRDISDNALKVLYRLNKSGYEAYLVGGGVRDLLLGRKPKDFDITTSAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQQAEDSDKNSSQQAQNGML
LRDNIFGSIEDDAQRRDFTINSLYYGISDFALRDYTGGLRDLKEGIIRLIGDPETRYRED
PVRMLRAVRFAAKLDMSISPETAEPIPRLASLLREIPPARLFEESLKLLQSGYGYKTYLK
LCEYQLFQPLFPLIARNFTEQHDSPMERILVQVLKNTDHRLHNDQRVNPAFLFAAMLWYP
LIEHAQKLTQESGLAYYDAFALAMNDVLDEECRSLAIPKRITSLVRDIWLLQLRLSRRQG
KRAHKLMEHPKFRAAYDLLLLRAEVEKNHELQRLAQWWGEFQEATPTQQKSMLNTLGADP
APRRSRPRRPRKPVPRKEGV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgattattccgcgggatcagcacaatatctcccgcagagatatcagtgacaatgca
ctgaaggttctctatcgcctgaataaatcaggttacgaagcttatctggtgggcggcggt
gtccgcgacctgctgctgggcagaaaacccaaagatttcgatatcaccaccagcgccacc
cctgaacaggtgcgaaaactgttccgtaactgtcgtttggttggccgccgcttccgtttg
gctcatgtgatgtttggccctgaaattattgaagtagcgactttccgtggccaccacgag
cagcaacaagcagaagacagcgataagaactcctcccagcaggcgcaaaatggcatgttg
ctgcgtgacaacatctttggctccatcgaagatgatgctcaacgccgtgatttcaccatt
aacagcctctactacggtatttctgattttgcgctgcgtgactacaccggcggcttacgt
gatctgaaagaaggtattattcgtctaattggcgacccagaaacccgttaccgtgaagat
ccggtacggatgctgcgtgcggttcgttttgccgcaaaactggatatgtcaatcagcccg
gaaacggcagagcctataccgcgtctggcctcactgttgcgcgaaatcccgcccgcccgc
ctgtttgaggagtcactcaagctgctgcaatccggctacggctataaaacctatttaaaa
ctgtgcgaataccagcttttccagccgctattcccactgattgcccgtaattttactgaa
cagcatgattcgccaatggagcgtattctggttcaggtactgaaaaataccgaccaccgt
ctgcataatgatcagcgggttaatcctgccttcttatttgcggcgatgctgtggtatccg
ctgattgaacatgcgcagaagttaacgcaggaaagcggcttggcctattacgatgcattt
gcattggccatgaatgatgtactggacgaagagtgtcgctcactggcgatccctaaacgt
atcacctcactggtacgggatatctggttgttacaactgcgtctgtcacgtcgtcagggg
aaacgtgcccataagctgatggaacaccctaaattccgggcggcttacgatctgttactc
ctacgggcagaagtggaaaaaaatcacgagctgcaacgtttggcgcagtggtggggcgaa
ttccaggaagccactcccacgcaacagaaatccatgctgaatacattaggtgctgatcct
gcgccacggcgttcacgtccacgccgcccacgcaagccagtaccccgtaaagaaggggta
taa
DBGET
integrated database retrieval system
