Yersinia pestis CO92 (biovar Orientalis): YPO3454
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Entry
YPO3454 CDS
T00063
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Pathway
ype00230
Purine metabolism
ype00240
Pyrimidine metabolism
ype01100
Metabolic pathways
ype01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
YPO3454 (nrdD)
00240 Pyrimidine metabolism
YPO3454 (nrdD)
Enzymes [BR:
ype01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
YPO3454 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CAL22042
UniProt:
A0A5P8YBY1
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Position
3860916..3863054
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AA seq
712 aa
AA seq
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MKTVVIKRDGCQVPFDEVRIKEAVERAALAVGVVDADYCATVARVVAQTMENQPKVDIRE
IQNAVENQLMAGQYKQLARAYIEYRHDRDISRELRGRLNQEIQGLVEQSNKALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHLLPRDVVLAHERGEIHYHDLDYAPFFPMFNCMLIDL
EGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESF
NKHKAVAEEWQIPDVAGYAMSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WQSRMIQQAILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDANYDIKQLALECATKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGVYEEEGQQIHDGRNNLGVISLNLPRIALEAK
GDENQFWQLLDERLLIAKKALMTRIARLEGIKARVAPILYMEGACGVRLQADDNIAEIFK
NGRASISLGYIGIHETINALFGHQTHLFDDQKLREKAIAIVAHLKQATDDWKDETGYAFS
LYSTPSENLCDRFCRLDTAEFGVVEGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ANGGFICYGEYPNLQHNIRALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFSCTSKGF
TCPKCGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLANGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacagtagtgattaaacgggacggctgccaggtaccttttgatgaagttcgtatc
aaagaggctgttgagcgcgcagcattagctgttggcgtggtcgatgccgattattgtgca
accgttgcccgagtggtcgctcaaacgatggaaaaccagccgaaggttgatatccgtgaa
attcaaaacgcggtagaaaaccaactgatggcgggtcaatacaaacagttagcccgggct
tacatcgaatatcgtcatgatcgtgatatctcacgggaactgcgtggccgcttgaatcag
gaaattcaagggttagtggagcaaagcaacaaagcactgctgaacgaaaatgccaacaaa
gacagcaaagtgatccctacccagcgcgatctgttggccggtattgttgccaagcactac
gctaaacagcatcttttgccccgcgatgtggtgctggcccatgagcgcggcgaaattcac
tatcatgatctggattacgcgccgttcttcccgatgttcaactgtatgttgattgatttg
gaaggcatgttaacccaaggttttaaaatgggtaatgcggaaatagagccgccaaaatcc
atttctaccgcaaccgctgtaaccgcacaaattatcgcgcaggttgccagccatatctat
ggtggcaccaccattaaccgtattgatgaagttttggccccttttgtcacggaaagcttt
aataaacataaggctgtcgccgaagagtggcagatccctgatgttgcaggttatgccatg
tcgcgtaccgaaaaagagtgttacgacgccttccagtcactggagtatgaggtcaataca
ctgcataccgcgaatggccaaacgcccttcgtcaccttcggttttggcttgggcaccagt
tggcaatcacgcatgatccagcaggctattttgcgtaatcgtattgcgggcttgggtaaa
aaccgtaaaacggcggtattcccaaaactggtatttgctatccgcgatggcctgaaccac
aaatttggcgatgctaactacgatatcaaacagttggcgctggagtgcgcaaccaagcgc
atgtatccagatattcttaattatgatcaagtggttaaggtcactggctcctttaaaacg
ccaatgggctgccgtagcttcctcggcgtgtatgaggaggagggtcaacaaatccacgat
ggccggaataatttgggagtgatcagccttaatctgccacgtatcgcgttggaagcaaaa
ggggatgaaaaccaattttggcagttgctggatgagcgcctgcttatcgcgaaaaaagcg
ctaatgacccgaattgcccgtttagaagggatcaaagcacgagtcgcccccattctgtat
atggaaggtgcttgcggtgtacgcttacaagcggatgataatattgccgaaatctttaaa
aatggccgtgcgtcgatctcgctgggctatatcgggatacatgaaaccattaatgcctta
ttcggccatcagacccatctctttgatgaccagaagctgcgcgaaaaagccatcgccatt
gtggctcatttgaaacaggctaccgatgattggaaagatgaaaccggttatgcctttagc
ctatacagcaccccaagtgaaaacttgtgtgaccgcttctgccgccttgataccgctgaa
tttggtgtggttgaaggggtgacggacaaaggctattacaccaacagcttccatctggat
gttgagaaaaaagtgaatccctacgacaaactggatttcgaagccccttatccgccgctg
gctaacggtggtttcatctgttacggcgaataccctaatttgcagcacaacatccgggcg
ctggaagacgtctgggattacagctacagccgggttccttattacggcaccaacacgcca
attgatgagtgctatgaatgcggcttcaccggtgaattctcttgtaccagcaaaggcttt
acctgcccgaaatgcggcaaccatgagccatcgaaagtgtcggtcacccgccgggtatgt
ggttatttgggtagcccagatgcacggccatttaatgcgggtaaacaagaagaagtgaaa
cgccgggtgaaacatctggctaacgggcagttgggctga
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