Yersinia pseudotuberculosis PA3606: BZ19_1142
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Entry
BZ19_1142 CDS
T03846
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
ypf
Yersinia pseudotuberculosis PA3606
Pathway
ypf02020
Two-component system
ypf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ypf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BZ19_1142
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BZ19_1142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypf03021
]
BZ19_1142
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ypf02035
]
BZ19_1142
Transcription machinery [BR:
ypf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZ19_1142
Bacterial motility proteins [BR:
ypf02035
]
Flagellar system
Flagellar assembly proteins
Stator
BZ19_1142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
YcbB
UPF0147
Motif
Other DBs
NCBI-ProteinID:
AJK17043
LinkDB
All DBs
Position
1296919..1297641
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVASAMQQVEQRVGRPATEQEV
AQVLDIGLVEYRQILLDTNNSQLFSYDEWREEHGESVEPLLEGHEDANPLKHLLEGNLRQ
RVIEAIEALPEREKMVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRARLNNDA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatttgtataccgccgaaggcgtgatggataagaattccctctggaaacgctat
gttcctttggttcgccatgaagcattgcgtctacaggtgcgtctacccgccagcgtggag
ttggacgatttattgcaggctggggggattggcctgctgaatgctgtcgagcgctatgat
gctttacaaggcaccgcgtttactacgtatgcggtacagcgcatacggggggcgatgctg
gatgaactgcgtagccgtgattgggcacctcgcagtgtgcgccgtaatgcacgggaagtg
gccagtgccatgcagcaagtcgaacagcgagtagggcgtccggcgaccgaacaggaagtc
gcgcaggttcttgatattggcttggttgagtaccgccagatcctgttggacaccaacaat
agccaacttttctcctacgacgaatggcgtgaagagcacggcgaaagtgtcgaacccctg
ttggaagggcatgaagatgccaatccactaaaacacttgttggaaggtaatctgcgtcag
cgcgtgattgaagcgatagaggcgttgccagaacgcgaaaaaatggtgcttacgttgtat
taccaggaagagctgaatttgaaagaaattggtgcggtgcttgaagttggggagtcccgc
gtcagtcaacttcatagccaagcgataaaacgcttacgcgcccgcctaaataacgacgct
taa
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