Yersinia pseudotuberculosis PA3606: BZ19_121
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Entry
BZ19_121 CDS
T03846
Name
(GenBank) tRNA pseudouridine synthase, TruD family protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ypf
Yersinia pseudotuberculosis PA3606
Brite
KEGG Orthology (KO) [BR:
ypf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypf03016
]
BZ19_121
Enzymes [BR:
ypf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BZ19_121
Transfer RNA biogenesis [BR:
ypf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BZ19_121
Prokaryotic type
BZ19_121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AJK14679
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All DBs
Position
155390..156439
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AA seq
349 aa
AA seq
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MDMENLTWLHGKPTASGILKANPEDFVVVEDLGFEPDGEGEHLLVRIRKNGCNTQFVADY
LARFAKLHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLATFELEGCEVLEAVRHKRKL
RIGSLKGNAFTLVLRHITDRQDVEQRLQQIAAQGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSHRLAQQLSTTVLEGDALQLSGRGSWFVAQADEL
AALQQRVTAGELNITAPLPGDSELGTHGEALAFEQACLAEQTELLSLIKRERVEGSRRAV
LLKPQNMISNWWDDVTLELSFWLPAGSFATSVVREIMNQDRADDTDIIE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaaaacctgacctggctacacggtaaacctacggcgagcggtattttaaaa
gcgaatccggaagattttgttgtcgtagaggatttgggatttgaaccggatggggaaggt
gagcatctgctggttcgtattcgtaaaaatggctgcaatacccaattcgttgctgattat
ttggcgcgctttgccaaacttcatccgcggttggtgagttatgcggggttaaaagaccgc
catgcggtcaccgaacagtggttttgtttacacttgccaggaaaagaagcgccagatctg
gccacctttgagctggaagggtgtgaagtattggaagcggtgcggcataaaagaaaatta
cgcattggttcactgaaaggcaatgcgtttaccttagtactgcgccatattacggatcgc
caggatgtggaacaacgtttacagcaaatagccgcccagggcgtacccaactattttggt
agccagcggtttggccgtggtggtaataatctggtgcaggcccgtttatgggcgaataat
gaaattcgggtaaaagaacgcagcaaacgtagcttttatctgtctgccagtcgcagcgcg
atgttcaatctgattagcagtcaccgcttggcgcaacaactgtcgacgacggtactggag
ggtgatgcattacaattatccgggcgtgggagttggtttgttgctcaagcggatgaatta
gccgcgttgcaacagcgcgttactgcgggtgaactgaatatcaccgcgcctttaccgggg
gacagtgaactgggtacccacggtgaagcattagcctttgaacaggcgtgtttggcagag
caaactgaattactgtcattgattaagcgtgagcgcgttgaaggtagccgccgggcagta
ctgctaaaaccgcagaatatgataagcaactggtgggatgatgtcactcttgagctgagt
ttctggctccctgcggggagctttgcgaccagtgtagtgagggaaataatgaaccaggat
cgggctgatgatacggatattattgagtaa
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