Yersinia pseudotuberculosis PA3606: BZ19_3663
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Entry
BZ19_3663 CDS
T03846
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ypf
Yersinia pseudotuberculosis PA3606
Pathway
ypf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BZ19_3663 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypf03019
]
BZ19_3663 (recQ)
03400 DNA repair and recombination proteins [BR:
ypf03400
]
BZ19_3663 (recQ)
Enzymes [BR:
ypf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BZ19_3663 (recQ)
Messenger RNA biogenesis [BR:
ypf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BZ19_3663 (recQ)
DNA repair and recombination proteins [BR:
ypf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BZ19_3663 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Peptidase_S66
zf-CXXC
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AJK18126
LinkDB
All DBs
Position
4197573..4199366
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AA seq
597 aa
AA seq
DB search
MQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSP
LISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQIKLLYIAPERLVMESFLD
QLYQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEATRGDIV
RLLNLDQPLIQISSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGIIYCNSRAKVEDTT
ARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDI
PRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGA
FAEAQTCRRLVLLNYFGEGKQQPCGNCDICLDPPKRYDGLADAQKALSCVYRVGQRFGLG
YIVEVLRGANNQRIREMGHDKLSVYGIGREQTHEHWVSVLRQLIHLGLLSQNIAQFSALQ
LTEAARPVLRAELPLQLAVPRIQSLKVRSSANQKSYGGNYDRKLFAKLRKLRKSIADEGN
IPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMALIRDHVDNNDD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtattgcgagatacttttggttatcagcaatttcggccagggcagcaggagatc
atcaacgcgacattgtcaggccaggattgtctggttgtgatgccaactggcggcggtaaa
tccttgtgttatcagatccctgccttggtgaccgatgggctgacattggtggtttcaccg
cttatctctctgatgaaagatcaggttgaccaactgttggcctatggcgtgggcgcgggt
tgtctaaactcatcgcagacccgtgaacagcaactggccgttatggatggttgccgcagt
gggcagattaaattgctgtatatcgcgccagaacggttggtgatggagagttttcttgat
caactgtatcaatggcgacccgccttgctggcagtggatgaggctcactgtatttcccaa
tggggccatgatttccgcccggaataccgtgctcttggtcagttaaagcagcgtttccct
gatctaccggttattgcattgaccgctacggctgatgaagcgacgcgtggcgatattgtg
cgcctgttgaatctggatcaacctctgattcagatcagtagttttgatcgcccgaatatc
cgctataccttagttgagaagtttaaacctctcgatcaactgtggcgttttgtacaagac
cagcgcggcaagagtggcattatttactgtaatagccgagcgaaagtggaagatacgacc
gcccgtttgcaaagccgtggcttgagtgttgccgcctatcacgccgggctggataacgag
cgccgtgctcaggtgcaagaggctttccagcgcgatgacttacaagtggtggtcgccacc
gtagcgtttggaatggggattaacaaaccgaacgtccgttttgtcgtgcattttgatatc
ccacgcaccatcgaatcctactatcaggaaacggggcgcgccgggcgtgatggcttaccg
gctgaggccgtgttgttgtacgatccggcagatatggcgtggttacgccgttgccttgaa
gagaaacctgcgggtgctcagcaagatatcgaacggcataaactcaatgcaatgggggca
tttgccgaagcgcaaacctgtcgccgtttggtgctgctcaactattttggtgaaggtaaa
cagcagccatgcggtaactgcgatatctgtctggatccgccgaagcgttacgatggtctg
gcagatgcgcaaaaggcgctctcttgcgtctatcgggtagggcaacgctttggcttaggg
tacatcgttgaggtgctgcgtggggcaaataaccagcgtattcgtgagatgggccatgac
aagctttcggtgtacggcattggccgtgaacaaacccatgaacactgggtcagtgtcttg
cgccagttgatccatttggggctgctcagccagaatattgcccagttctctgccttgcaa
ctgactgaagcggcgcgcccggtcttacgcgcagagctgccattacaactggcggtaccg
cgtattcagagcctaaaagtgcgtagcagtgccaatcagaaatcctatggtggcaattat
gatcgcaagttgttcgctaagctgcgcaaactgcgtaaatcaattgctgatgaaggcaat
atcccgccttatgtggtgtttaacgatgcgaccttgctggagatggctgagcagatgccg
attactgccagcgagctattgagcgttaatggtgtcggtcagcgtaaactagaacgtttt
ggtgcaccatttatggccctgatccgtgatcatgtggataacaacgatgactaa
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