KEGG   Yersinia pseudotuberculosis PA3606: BZ19_4042
Entry
BZ19_4042         CDS       T03846                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ypf  Yersinia pseudotuberculosis PA3606
Brite
KEGG Orthology (KO) [BR:ypf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ypf02048]
    BZ19_4042 (hsdR)
Enzymes [BR:ypf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BZ19_4042 (hsdR)
Prokaryotic defense system [BR:ypf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BZ19_4042 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like EcoR124_C ResIII HSDR_N DEAD
Other DBs
NCBI-ProteinID: AJK15042
LinkDB
Position
complement(4609774..4613022)
AA seq 1082 aa
MTTFKTEAQFEQAFIEVLTHKGWETEILNNKTEADLLQNWASILFENNRQRDRLNDVPLT
ATEMQQIIEQIKELKTPLKLNGLINGKTVAIKRDNPADTLHMGKEVSLKIYDRQEIAAGQ
SRYQIVQQPKFERGSPLRNDRRGDVLLLINGMPVIHLELKRSGTPVSQAVNQIEKYSKEG
VFSGLFSLIQVFVAMEPNEAKYFANPGLDGKFNPDYQFNWADFNNEPMNHWKDIASTLLS
IPMAHQLIGFYTVADDTDGVLKVMRSYQYYAANAISDKVAKTNWQQLGSAANNPDRLGGY
VWHTTGSGKTMTSFKSAQLIAQSKDADKVIFLMDRIELGTQSLAEYRNFAGDGEDVQATE
NTHVLITKLKSSATADTLIVSSIQKMSNIFEEVDDEGTATNSADIEKIRAKRLVFIIDEA
HRSTMSGGKENKEGMLVRIKKTFPKALFFGFTGTPIHDENQVNSNTTADVFGNELHRYSI
ADGIRDGNVLGFDPYKICTFKDKGLRQAVALEQAKADSVADAMSTAAKKKKFNYFMNDVL
MAGHKDATGKYIKGIEDYVPKEQYLTADHQEKVVEDILAEWDVLSQGNKFHAILATNSIA
EAIDYYRRLKAAKPELKVSALFDPNIDNDGSGDRDPTFKGDALDEIMADYNARYGQDFDF
ARHAAFKKDLAARLAHKKPYERIHTEPSKQLDILIVVDQMLTGFDSKWLNTLYLDKVIKY
QNIIQAFSRTNRLFGPDKPHGIIRYYRYPHTMEQYINDAVKLYSGDRPIGLFVDKLESNL
KAMNELVADITELFVSAGVENFEKLPDDIETCAQFAKLFNTFSQHLEAAKVQGLHWEQSV
YSPTENDVEHEVTLAIDEQTYLSLVLRYKELVAKGDGGGAGGGDVPFDISGYLTEIDTGK
IDADYMNSRFDKFLKELNQHQDPASIESTLNELHKSFASLTQSEQKYAKLFLHDLQRGDA
QLIEGHTFRDYINTYKDNAENAQLNAVVNALGLDKERLIALMADSVNDKNLNDFGRFDAL
KDSVNKSKAKIYFEKQDGVIIPPFKLNIRIDQFLKQFILAQTDDFLSDRDVVGDVMDIPP
SA
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgaccacctttaaaaccgaagcgcaatttgagcaggcctttattgaagtactgacccat
aagggctgggaaacagagatactcaacaataaaaccgaagcggatttactgcaaaattgg
gcgtccattttgtttgaaaataatcgccagcgggaccgtttaaacgatgttccgttaacc
gcgactgaaatgcagcaaattattgagcaaatcaaagaacttaaaacaccgctcaagctt
aatggtttaattaacggcaaaaccgtggccattaagcgcgataacccagccgatactttg
catatgggcaaagaagtcagcttaaaaatatacgatcgccaagaaattgcagccggccaa
agccgttaccaaattgtgcaacaacccaaatttgaacgtggcagccccttgcgtaacgac
cgacgcggcgatgtgctattactgatcaacggtatgccggtgatccatttagagctgaag
cgcagcggcactccggttagccaggcagtcaaccaaattgaaaagtacagcaaagagggc
gtctttagcggcctgttttcgctcatccaagtgtttgtagccatggagccaaacgaggcc
aaatactttgccaaccccgggctagacggtaagtttaaccccgactatcaatttaactgg
gccgattttaataacgaacccatgaaccactggaaagacatcgcctctaccttgctttct
atccctatggcgcaccagttgattggcttttataccgtcgccgacgataccgacggcgtg
cttaaagtgatgcgcagttatcagtattacgctgccaatgcaatatctgacaaagtggcc
aaaaccaactggcagcaactgggtagcgcggccaataaccccgatcgcctcgggggttat
gtgtggcataccaccggttcgggtaaaaccatgaccagctttaaatcggcgcagttgatc
gcacaatccaaagatgccgataaagtgatttttttaatggacaggattgaactgggcacc
cagtcgctcgcggaatatcgcaattttgctggcgatggtgaagacgtgcaagccaccgaa
aatactcatgtactcattaccaaattaaaaagcagtgcaactgccgatacgttaattgtt
agctctattcaaaaaatgagtaatatttttgaagaagttgatgatgagggaacagcaaca
aattcggccgacatagaaaaaatccgcgctaagcgcttggtgtttattatcgatgaggcc
catcgctcgacgatgagtggaggcaaagaaaataaagaaggcatgttggtaagaattaaa
aaaacattccccaaggcactcttttttggttttaccggcacgccgattcatgatgaaaat
caagttaatagcaatactaccgctgatgtgtttggcaacgagctacaccgctacagcatt
gccgacggtattcgcgacggcaatgttttgggctttgacccttacaaaatctgtaccttt
aaagataaaggtttacgccaggccgtcgcccttgaacaggctaaggccgattcggttgca
gatgcaatgtctacggctgccaaaaagaaaaaatttaattattttatgaatgatgtgcta
atggctggccataaagatgcaacaggcaagtatatcaaaggcatagaagattatgtgcca
aaagaacaatatctcactgcagaccatcaagaaaaggtggtagaagatattttggccgag
tgggatgtgctcagccaaggcaataaatttcacgctattttggccactaacagcattgcc
gaagccattgactattaccgccgtttaaaagccgccaaacctgaacttaaagtatcggcc
ctatttgacccaaatattgataacgacggcagtggcgaccgagaccccacctttaaaggc
gatgctctggacgaaattatggccgactataatgcgcgttatggccaggattttgatttt
gcccgccacgcggcctttaaaaaagatttagcggcacgacttgcccataaaaagccttac
gagcgcatccataccgagccttcgaagcaattagatatactgattgtagtggatcaaatg
ctcactggctttgactctaaatggctcaataccttgtatttagacaaggtgattaaatac
caaaatattattcaagcgttctcgcgcaccaatcgcttgtttggccccgacaaaccccac
ggtatcatccgttattatcgttatccacacaccatggagcagtacattaacgatgcggta
aaactctattccggcgacagacctatcggcttatttgttgacaagttagaaagcaacctt
aaagccatgaatgaattagtcgcggacattaccgagctattcgtcagtgcgggtgttgag
aactttgaaaaactgccagacgatatagaaacctgtgcccaattcgccaaattatttaac
acctttagccaacacctggaagcggctaaagtacaaggtttgcattgggaacagtcggtc
tattcccctactgaaaatgatgtagaacatgaggtaacgctggctatagacgaacaaact
tacctgagcctggttctgcgttacaaagagttagtcgccaaaggtgatggtggtggcgca
ggtggcggcgatgtgccttttgatatcagtggttatttaactgaaatagataccggcaaa
atcgatgccgactatatgaacagccgctttgataaatttttaaaagagctgaaccaacac
caagaccctgcgagcattgaaagtacattaaatgagctgcacaagtcgtttgcatcgctc
acccaaagcgagcaaaagtacgccaagctcttcttgcacgacttgcagcgcggcgatgcg
cagttaattgaaggccatacttttagagactatatcaacacctacaaagataatgctgaa
aatgcgcaattaaacgccgttgttaatgctcttggtttagataaagaacggctcatagca
ttaatggctgatagtgttaatgataaaaatctcaatgattttggtcgcttcgacgcatta
aaagattcggtaaataaatcgaaagccaagatctattttgaaaaacaagacggcgtaatc
atacctccatttaaattgaatatacgtattgatcagtttttaaagcagtttattttggca
caaacggatgatttcttaagtgatagagatgttgttggtgatgtgatggacatccctccc
tcagcgtaa

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