Yersinia pseudotuberculosis PA3606: BZ19_707
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Entry
BZ19_707 CDS
T03846
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
ypf
Yersinia pseudotuberculosis PA3606
Brite
KEGG Orthology (KO) [BR:
ypf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypf03400
]
BZ19_707
DNA repair and recombination proteins [BR:
ypf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BZ19_707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
DUF7577
SWI2_SNF2
Zn_ribbon_3
zf-tcix
AAA_30
AAA_22
Zn_Ribbon_1
AAA_16
SLFN-g3_helicase
DZR
AAA
Motif
Other DBs
NCBI-ProteinID:
AJK15771
LinkDB
All DBs
Position
complement(791331..793088)
Genome browser
AA seq
585 aa
AA seq
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MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECH
RISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPH
IVSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALINAFKQQQ
LRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNP
HDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDQG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQ
LETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYKGRFRRADALA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcacactacggccttatcaacgagaagcggtcgatgccacggtggcttatttt
cgacgccacaccacacccgcactcattgttctaccaaccggcgcaggcaagagtttagtg
atcgcagaacttgcgaaactggcccgtggccgtgtgttggtcttagcgcatgtcaaagag
ttggtggcacagaatcacgcaaaatactgcgcatacggtcttgaggccgatatctttgcc
gccgggttgcaacagcgacaaagcgagggaaaagtggtctttggcagcgtgcaatcggtg
gcccgtaatctgccgctatttgatagcgcattttctctgctgattatcgatgaatgtcat
cgtatcagcgatgaagatgacagccagtatcagcaaatcattcagcatttacgcacgggg
aatccgcagttacggctgttggggctgacggccaccccttatcggctggggaaaggctgg
atttatcagttccactatcacggtattactcgtggtgatgaaaaagccctgttccgtgac
tgtatttatgaattaccgctgcgttatatgattaaacatggctttctggtgccacctgaa
cggctggacatgccggtcgtacagtatgatttcagccgcctgaccagcaacagtgatggc
ttgttccgtgaggcagatttagatcgagaacttaagcaacaacaaagaattaccccacat
attgttagccaaataatcgaatatgcggctcagcgtcgcggtgtgatgatttttgccgcc
accgtagagcacgccaaagaagtctatggcctgttgcccaaaggtgaagccgcgttggtc
agcgcggggaccccacctgcggaacgggatgcgctgatcaatgcctttaaacagcaacaa
ttgcgctatttggtcaatgtgtcggtactgaccaccggttttgatgccccccatgtggat
ctgattgccattcttcgtccaaccgaatccatcagtttatatcaacaaattgttggccga
ggcctgcggctgtttcccggtaaagaggattgcttgattctggattatgcgggtaatccc
catgaccttttcacgccagaagtgggcacgagcaaacctcacagcgggagccaaccagta
caagtcttctgccccgattgtggttttgccaatatcttctgggggaaatgcactgagtcc
ggcgaaataattgagcactatggccgccgctgtcagggctggtttgaggatgatcagggt
gcacgtgcgcaatgtgactaccgttttcgctttaaatcctgcccacattgcggagcagaa
aatgatattgccgcccgtcgctgccatcaatgccaggcggttttggtcgatcccgacgat
atgctgaaagccgccctgaaactgaaagatgcgctggtattgcgctgtggcggtatgcag
ctagaaacgggccaagacgccaaaggcgagtggctgaaagcgacctattacgatgaggat
ggcaccaataccagtgagcgcttcagattaaccacacctgcacaacgtatggcattcgaa
cagatattcctgcgccctcaccagcgcgcaccgggcattgcccttaaatggcacaccgcc
gctgatattatcgcgcagcaggcgttgctacgttatccggattttgtggtcgcccgccgt
cgggggcagtggtggcaaatcagggagaaggtatttgattacaaggggcgttttcggcgg
gccgatgcccttgcctga
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