Yersinia pseudotuberculosis PA3606: BZ19_841
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Entry
BZ19_841 CDS
T03846
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ypf
Yersinia pseudotuberculosis PA3606
Brite
KEGG Orthology (KO) [BR:
ypf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypf01002
]
BZ19_841
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypf01011
]
BZ19_841
Peptidases and inhibitors [BR:
ypf01002
]
Cysteine peptidases
Family C82
BZ19_841
Peptidoglycan biosynthesis and degradation proteins [BR:
ypf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BZ19_841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJK18241
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Position
961520..963229
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AA seq
569 aa
AA seq
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MSVAQSRSQLLAALPKDVVPLYAAELASLYAANQMQPMWQDRVAVQRFQQQLAEVGLSGI
QPQFMQWVKWLSEPEITGMARDIILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPA
AVLNAWQKAVNEGSTASYLASLAPQHPQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQL
SDDIPALREILDRTGMLHPTTPVKAPEVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVS
PSAVSVPESDDAAPAPMPPVSVVTLTDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREW
LNVSPQTRATLLALNIQRLRILPGHVDNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSR
KTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINP
SMIDWSIISPNNFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSS
GCVRVNKASDLANMLLQDAGWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGK
PQFRTDIYNYDKMVRSGAQISQQAEFLLQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggctcaaagtcgttcgcaattattggccgcgcttccaaaagatgtcgtgcca
ctctatgctgcggaattagcgtcattatatgcggcgaaccaaatgcagcctatgtggcaa
gaccgggttgctgttcaacgttttcagcaacagttagcggaggttgggctttcaggcatt
caaccgcagtttatgcaatgggttaaatggttgagcgagccagaaatcaccggtatggcg
cgtgatattattctatcggatgcgatgctgggttatttacactttatttccggtgtcggt
gctaatggcagtgtttggttatacagtaatgtgccttacaaaatggccatgccgcctgca
gcagttttaaacgcctggcagaaagcggtcaatgaaggctcgacagcctcttatctggcg
tcgttggctccgcagcatccgcaatacgataaaatgcaacaggcgttgaagttgatgcta
gcagaccgacgcccgtggccacagatgcctactgggccaagtttacggccggggcaactt
agcgacgatatccctgcattgcgggaaatccttgaccgaacgggtatgttgcacccaaca
acccccgtgaaagcgccagaggtgatccctgtggagaaccctacggtggccgtcgttaat
gacgatctctctgttgatgaagaaaaaaatcggactcagaccaacagcttggtggtcagc
ccatcagccgtctctgtccctgagagcgatgatgcggcacccgcaccgatgcctcccgtg
agcgtggtcacgttaactgacaatatctatactcctgagttggtagaagccgttaaacgc
ttccagcaatggcaggggctcactgatgacggtgttatcggcccccgtacccgcgaatgg
ttgaatgtctcgccacaaacgcgggccacgttattggcattgaatatccagcgattacgt
attttgccggggcatgttgataacgggattatggttaatatcccaaattattctctgaat
tattataaagatggggccgaagtgctttcatctcgggtgattgttggccgtccaagtcgt
aaaacgcccctgatgagtagtgcgttgaataatgtggtggtgaacccgccgtggaacgtg
ccgacctcattggtacggcaggatatcgtgcccaaagcacgtaacgatgccgggtatttt
cagcgtaatggctataccgtgttgtccggatggagtaatgatgctgaagtgatcaatcct
tcaatgattgactggagtattatctcgccgaataacttcccttaccgtttgcgtcaggca
ccaggtgctaataactcgttagggcggttcaaatttaacatgccaagttctgatgctatc
tatttacatgacacgccgaatcatggcctgttccaaaaggacattcgcgccctgagttca
ggttgtgtccgtgtcaataaagcgtctgatttagcgaacatgctgctgcaagatgctggc
tggaatgatgcacgggtctcttccaaggtaaaacaaggtgataccacctacgtcaatatc
cgccagcgcgttccggtgcaattgtattatctgacagcatgggttgcggaagacggtaaa
ccgcagtttagaacagatatttacaattatgataaaatggtgcgatctggtgcacaaatc
tcacagcaggctgagtttttattgcaataa
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