Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0106
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Entry
YPC_0106 CDS
T01874
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yph03400
]
YPC_0106
DNA repair and recombination proteins [BR:
yph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
YPC_0106
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
AAA_10
SLFN-g3_helicase
FtsK_SpoIIIE
T2SSE
TrwB_AAD_bind
AAA_30
AAA_19
AAA_7
AAA_16
nSTAND_NTPase5
Hydrolase
AAA_25
SRP54
CbiA
AAA_28
P-loop_TraG
AAA_6
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADV96875
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Position
116686..118227
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AA seq
513 aa
AA seq
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MSNTLLIGKALVTEKTQPASRDLVILSALANRHGLITGATGTGKTVTLQKMAEQFSRIGV
PVFLADVKGDLSGIGAEGVNSEKLQARLAAIDVTDWQPQACPIVPWDIFAEKGHPIRATI
SDLGPLLLGRLLDLNDVQSGVLQLVFKIADDNGLLLLDMKDLRAIVQYVGDNAKQFRTQY
GNITSASIGAIQRGLLTLEEQGANQFFGEPMLDIHDLMQTDSHGQGVINLLAADRLINQP
KLYAIFLLWLLAELFEQLPEVGDVEKPKLVFFFDEAHLLFTDAPAALVDKVEQVVRLIRS
KGVGIYFVTQNPLDIPDKILGQLGNRVQHALRAFTPRDQKAVKAAAQTMRPNPAFSAEQV
ITELGVGEALISFLDEKGRPNVVERAMVIAPQSKMGALDAAARNHAINHSPLYGRYEEMI
DRESAYEKLSAGGFSTMGRAAEGEPSVPQQPTNQQGSGGGLMGGLNDLLFGSSGPRGGKR
DGIVQTAAKSMARDLGRQILRGVLGSITGGRKR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacacattacttattgggaaagcgctggttaccgagaaaactcagccagcttca
cgtgatttggtgatcttatcggcattggcaaatcgccatggcttaattaccggtgcgacc
ggtacaggtaaaactgtcaccttgcaaaagatggccgagcagttctctcgtattggtgta
cctgtatttttggcggatgtgaaaggggacttatccggtatcggggctgaaggggtgaat
tcggaaaaactacaggcccgtctggccgcgattgatgtcacggattggcagccacaggcg
tgtccgattgtgccttgggatatctttgctgaaaaaggccatcctatccgggcgacaatc
tcggatcttgggccgcttctacttggccgcttactcgatttaaatgacgtgcaaagtggt
gttttgcaactggtgtttaaaatcgccgatgacaacggcctgctgttgctggatatgaaa
gacctgcgtgctatcgtccagtatgttggggacaatgcgaaacagttccgtacgcaatac
ggcaatattacctccgcctctatcggcgcgatccagcgtggtttactcaccttggaagag
cagggtgccaatcaattttttggcgagccgatgctggatattcacgatctcatgcaaaca
gatagccacgggcagggcgttatcaatttactggctgctgaccgtctgattaatcagcca
aagttatatgccattttcctgctttggctgttggccgagctttttgaacagctaccggaa
gtgggtgatgtggagaagccaaaactggtctttttctttgacgaggcccatttgttattt
acggatgccccggcggcgttagtggataaggttgaacaagtggtgcggctgatccgctcg
aaaggggtcggtatctacttcgtgacacaaaatcctctggatatcccagataagatcctc
ggccaactgggtaaccgggtacaacatgcgttacgcgcttttacgccacgggatcaaaag
gcggttaaagccgcagctcagacgatgcggcctaatccggcattcagtgctgaacaggtg
attaccgagttgggcgtcggtgaggcgctgatttctttccttgatgagaaagggcggcct
aatgtggttgaacgggcgatggttatcgcaccgcaatcaaaaatgggcgcgttggatgca
gcagcacgtaatcacgcaatcaatcattccccactgtatggtcgctatgaagagatgatt
gaccgcgagtctgcttatgaaaagttatcggcggggggcttttctaccatggggcgtgcc
gctgaaggggagccttctgttcctcagcaaccgacgaatcagcagggtagtggtggtggc
ttaatgggcgggctgaatgatttactgtttggttcctcggggccgcgaggcggtaagcgg
gacggtattgtgcagactgcggccaagagcatggcacgggatttaggccggcaaattttg
cgcggtgttttggggtcaattacgggggggcgcaaacgctaa
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