Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0217
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Entry
YPC_0217 CDS
T01874
Symbol
rfaF
Name
(GenBank) ADP-heptose:LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00540
Lipopolysaccharide biosynthesis
yph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
YPC_0217 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yph01005
]
YPC_0217 (rfaF)
Enzymes [BR:
yph01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
YPC_0217 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
yph01005
]
Core region
YPC_0217 (rfaF)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
ADV96982
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All DBs
Position
complement(202070..203134)
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AA seq
354 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKAEYPAADIDVMAPAWCRPLLARMPEVRHAIPMPLG
HGAFAFEERRRLGLALRETEYDRAYVLPNSFKSALIPYFSGIKRRIGWRGEMRYFLLNDL
RILDKQAFPMMVQRYVALAYDKERIRSAADLPQPLLWPQLQVRDEEIAETTASFNLTDNR
PIIGFCPGAEFGPAKRWPHYHYATLAQKLIDDGYQVILFGSAKDNEAGEDIRQALSDTDR
EYCLNLAGQTSLEQAVVLIAACSAVVSNDSGLMHVAAALNKPLVALYGPSSPDFTPPLSE
KATVIRLITGYHKVRKGDSAQGYHQSLIDIQPEHVMAALEKQLATQECSVKGGD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggtcatcggcccttcatgggttggcgatatgatgatgtcgcaaagtctt
taccgtaccctgaaggccgaatatccggcagcagacattgatgtgatggcacccgcatgg
tgccgtccgcttctggccagaatgccggaagtccgtcacgcaattccaatgccgttaggc
catggggcatttgcttttgaggagcgtcgccgtttgggattggccttacgtgaaaccgag
tatgatcgtgcttacgtgttgcccaactcatttaaatccgcgctgataccttacttttca
gggatcaaacgacgtattggctggcgtggcgaaatgcgttatttcctgctcaatgacctc
cgtattctggataagcaagcctttccaatgatggtccagcgctacgttgcgctggcctat
gataaagaacgcatccgttcagcggcagatttaccacaaccgttgttgtggccgcaattg
caagtacgcgatgaagaaattgcagagacaacggcctcattcaatctgaccgataaccgg
cccattattggattctgccctggcgcagaatttgggccagcgaaacgttggccgcattac
cactacgccacgctggcgcagaaattgattgatgatggctatcaggtcatcttattcggt
tctgcgaaagacaatgaagctggtgaagatatccgtcaggctctcagcgatacagatcgt
gaatattgcctcaatctggcagggcagacctcactggaacaagcggtcgttctcatcgcc
gcctgtagtgccgtcgtgagtaacgactctggtttaatgcatgtcgcggcggcactcaac
aagccattagtggcattgtatggcccgagcagcccagacttcacgccaccactgtcagag
aaagccacggtgatccgtctgattaccggctatcacaaagtccgcaagggcgattctgca
cagggctatcatcaaagtttgattgatatccaacccgaacacgtgatggccgcgcttgag
aagcaattggctacgcaagaatgctcagtcaaagggggcgattaa
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