Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0360
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Entry
YPC_0360 CDS
T01874
Symbol
rffG
Name
(GenBank) dTDP-D-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00521
Streptomycin biosynthesis
yph00523
Polyketide sugar unit biosynthesis
yph00525
Acarbose and validamycin biosynthesis
yph00541
Biosynthesis of various nucleotide sugars
yph01100
Metabolic pathways
yph01110
Biosynthesis of secondary metabolites
yph01250
Biosynthesis of nucleotide sugars
Module
yph_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
YPC_0360 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
YPC_0360 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
YPC_0360 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
YPC_0360 (rffG)
00525 Acarbose and validamycin biosynthesis
YPC_0360 (rffG)
Enzymes [BR:
yph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
YPC_0360 (rffG)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
ADV97108
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All DBs
Position
342783..343850
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AA seq
355 aa
AA seq
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MRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLSVVAGSERYAFEQVDI
CDSSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLS
VEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVV
TEGVVGETYNIGGHNERKNIEVVETICALLDELVPAKPAGIAHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPQETFESGIRKTVLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcgaattctcgtcacaggcggggccggttttatcggctctgcggtggtcaggcat
attattgatggcacctcagatagcgtggtggtagtcgataaactcacctatgccggtaat
ctggagtcgctgtcagtggttgcgggcagtgagcgttatgctttcgaacaagtcgatatc
tgtgacagcagtgagttggatcgggttttcgcacagtatcagccgaatgtggtgatgcat
ttggctgccgagagccacgttgaccgctcaattgatggccccgccgcgtttatcgagacg
aacgtggttggcacttacaccctgttggaagctgcccgtcactattggcaacaactgagt
gttgaagccaagcaggcgttccgctttcaccatatctcaacggatgaggtgtatggcgat
ttacacggcactgacgatttgtttaccgaaaccacgccgtatgcgccaagcagcccatat
tcggcgtctaaagcgtccagtgaccatttagtccgggcttggttgcgtacttatggttta
ccgactttggtgactaattgttcaaataattacggcccgtatcacttcccagaaaagctg
atcccgctggttattttaaatgcgttggcgggtaagccgctgcctgtttatggcaatggt
gctcaggtccgcgactggttgtatgtagaagaccacgccagagcgttgtatcaggtggtt
actgagggtgtggtgggtgaaacctacaatatcggcggccataatgagcgcaagaatatt
gaagtagttgaaaccatttgcgcgctattggatgagttggtgccagcaaaaccggcgggt
atcgcacactaccgtgatttgattacctacgtaaaagaccggccgggtcatgatatgcgc
tatgccattgatgctggcaagattgagcgggaactgggttggcgtccacaagaaaccttc
gaaagcggtatccgtaaaacggtcttgtggtatttgaataatgaatcttggtggcgtcgt
gttcaggatggctcttacgccggagagcgtttgggcttgagtgactaa
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