Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0425
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Entry
YPC_0425 CDS
T01874
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03089
RNA polymerase sigma-32 factor
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yph03021
]
YPC_0425 (rpoH)
Transcription machinery [BR:
yph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YPC_0425 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ADV97162
LinkDB
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Position
401251..402108
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AA seq
285 aa
AA seq
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MTKEMQTLALVPQGSLEAYIRAANAYPMLTAEEERELAERLHYQGDLGAAKQLILSHLRF
VAHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVAKELGVTSKDVREMESRMSAQDM
TFDPSPDDEARDGQFMAPVLYLQDKTSDFADGIEEDNWDSHAADKLSYALEGLDERSQHI
IRARWLDDENKSTLQELADQYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagccttagtgccccagggtagtctggaagcctatatt
cgggctgccaatgcctatccaatgctaactgcagaggaagaacgggagctggctgaacgg
ctgcattaccagggcgatctgggagcggctaaacagcttatcctgtctcacctgcgcttt
gttgctcatgttgcccgcaactattccgggtacggtttgccacaagctgaccttattcag
gaaggtaatattggcttgatgaaagcggttcgccgttttaaccctgaagtcggggtgcgt
ctggtgtcctttgcggttcactggatcaaagcagaaattcatgaatatgttctgcgtaac
tggcggattgtgaaggttgcaactaccaaagctcagcgtaagctgttcttcaacctgcgt
aaaaccaagcagcgcctgggctggtttaatcaggacgaagtagaattggtcgccaaagag
cttggcgtgaccagtaaagacgttcgcgagatggagtcacgcatgtccgctcaggatatg
acgttcgatccttctcctgatgatgaagcacgtgacggccaattcatggccccagtcctg
tatttgcaggataaaacctctgattttgctgatggcatcgaagaggataactgggacagc
cacgcagcagataaactgtcttatgcgttggaagggttggacgagcggagccaacatatt
attcgcgcccgttggctggacgatgagaacaagtccaccttacaagaactggccgatcag
tacggtgtgtctgctgaacgtgtacgtcagcttgaaaagaacgcgatgaaaaaattgcgt
atggcgattgaagcctga
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