Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0557
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Entry
YPC_0557 CDS
T01874
Symbol
truB
Name
(GenBank) tRNA U55 pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yph03016
]
YPC_0557 (truB)
Enzymes [BR:
yph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YPC_0557 (truB)
Transfer RNA biogenesis [BR:
yph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YPC_0557 (truB)
Prokaryotic type
YPC_0557 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
CATSPERG_beta-prop
Motif
Other DBs
NCBI-ProteinID:
ADV97268
LinkDB
All DBs
Position
complement(546901..547875)
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AA seq
324 aa
AA seq
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MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNLTQAQIDTALESFRGESQ
QIPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSERMVTLEQLTAMVEAAQAEGRSPNPELDSL
LLPMDSAVLNFPEVNLLPSVAAYVKQGQPVHVSGAPSEGMVRITEGKERNFIGIGTIAED
GRVAPKRLVVESVEVENLPVENKK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtccacgtcgtcgcggccgtgacattaacggcgttttgctattggataagccg
ctaggcctctcttctaatgacgttttgcaaaaagtaaaacgtctctttagcgctaatcgc
gctggtcacacgggtgctcttgatccattagcaaccggtatgttgcctatttgtctgggc
gaagcaactaagttttctcaattcttactcgattcagataaacgttaccgagtggttgct
cggctggggcaacgcacggatacctcagatgcggaaggtgcgttaatcagtgagcgtgag
gtcaatcttactcaagctcagatcgatactgcactggagagtttccgcggtgaaagccag
cagatcccctccatgtattctgcattgaaacatcaaggtaagcctctttacgaatatgcc
cgtcaggggattgaagtcgaacgtgaagctcgcagcattacggtttacgagttgctcttc
atccgttgggaaggcaatgatctggaactggaaattcactgttcgaaaggaacgtacatt
cgtaccatcatcgatgacttgggtgaattattgggttgcggcgcacatgtcagttatctg
cgtcgcttgcaggttgcgacttacccgagcgaacggatggtgaccctagagcagttaacg
gcgatggttgaggctgcgcaggcagagggacgctcgccaaatccagaactggattcgctg
ttattgccgatggacagtgccgttcttaattttcctgaagtcaatctgttaccttccgtg
gccgcttatgtaaaacaggggcaaccggtgcatgtgtcaggtgctcccagtgaaggaatg
gtccgaatcactgaaggtaaagagcgtaatttcattggtattggtactatcgcagaagat
ggccgcgttgcccctaaacgtttggttgtggaaagcgtggaagtagaaaatctgccagta
gaaaataaaaagtag
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