Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0642
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Entry
YPC_0642 CDS
T01874
Symbol
frdA
Name
(GenBank) fumarate reductase flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00020
Citrate cycle (TCA cycle)
yph00190
Oxidative phosphorylation
yph00620
Pyruvate metabolism
yph00650
Butanoate metabolism
yph00720
Other carbon fixation pathways
yph01100
Metabolic pathways
yph01110
Biosynthesis of secondary metabolites
yph01120
Microbial metabolism in diverse environments
yph01200
Carbon metabolism
yph02020
Two-component system
Module
yph_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yph_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yph_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YPC_0642 (frdA)
00620 Pyruvate metabolism
YPC_0642 (frdA)
00650 Butanoate metabolism
YPC_0642 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
YPC_0642 (frdA)
00720 Other carbon fixation pathways
YPC_0642 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPC_0642 (frdA)
Enzymes [BR:
yph01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YPC_0642 (frdA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
GIDA
FAD_oxidored
Lycopene_cycl
FabD_helical_ins
Motif
Other DBs
NCBI-ProteinID:
ADV97346
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All DBs
Position
626726..628549
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AA seq
607 aa
AA seq
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MQTFNADLAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQDH
DTFDYHFHDTVAGGDWLCEQDVVDHFVHSCPEEMAQLEIWGCPWSRKEDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDEGQARGVVAMNMMEGT
RVQIRANAVIMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
AGRTVATPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG
GIETNPQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAALRAMESGP
ANGSALDAQTRDVETRLSNLMKQEGTENWSKIRDEMGLSMEEGCGIYRTPELMQKTVDKL
AELKERFKRVKITDHSSVFNTDLLYTIELGYGLDVAECMAHSALNRKESRGAHQRLDEGC
TERDDVNFLKHTLAFHTPGGAPRIEYSDVKITKLVPAKRVYGGEATAQDAKDAKDAQDLK
DKEQAND
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacctttaacgccgatcttgccattatcggggccggaggtgctggcttacgtgca
gcaatagccgcagcggaagccaacccccaactgaagattgctttgatctcgaaagtttac
ccaatgcgtagccataccgtggccgccgagggaggatcagctgccgtcacacaggaccac
gatacgtttgactatcatttccacgataccgttgcgggcggtgactggttatgcgaacaa
gatgttgttgaccattttgtccacagttgccccgaagaaatggcacagttagaaatttgg
ggctgcccatggagccgcaaagaggacggttcggttaacgttcgccgtttcggtggtatg
aagattgaacgtacatggtttgccgccgataaaaccggtttccacatgctgcacaccttg
ttccaaacctcccttaagtatccacaaattcagcgttttgatgagcatttcgtcctggat
attctggtagacgagggtcaggcacgtggtgtggttgccatgaatatgatggaaggcacc
cgcgtacaaatccgtgcgaacgccgtgatcatggccactgggggggctggccgggtttat
cgctataacaccaacggcggtattgttaccggtgatggtatggggatggcattccaccat
ggcgttccactgcgggatatggaatttgtacaatatcacccaacgggcttgccggggtct
ggcatcctgatgactgaaggctgccgtggtgaaggcggaattctggtgaataaagacggc
tatcgttacttgcaggattacggcatggggcctgaaacgccactcggtgagcctaaaaac
aagtacatggaattaggcccacgggataaagtctcgcaagcattctggcatgaatggcgc
gctggccgtacggtcgcgaccccacgtggcgatgtggtttatcttgatttacgccatctg
ggtgagaagaagctgcttgagcgcctgccgtttatttgcgaattggcaaaagcctatgtc
ggcgttgacccggttaaagagcccatccctgtacgcccaaccgcgcattacaccatgggc
ggcatcgaaaccaatccgcagtgtgaaacccgaatcaaaggcttgtttgcggtcggcgaa
tgctcttctgtaggcttgcacggcgctaaccgtttaggctccaattcattggctgaactg
gtggtatttggccgagtggccggtgaacaagccgctttacgcgcgatggaaagcggcccg
gcaaatggcagcgcactggatgcccagactcgtgatgtggagacccgcctgagcaacctg
atgaaacaggaaggaacagagaactggtctaagattcgcgatgaaatgggtctgtcgatg
gaagagggttgcggtatttaccgtacaccagaactgatgcagaaaacggtggataaactg
gccgagctgaaagaacgcttcaaacgtgtgaaaatcaccgatcactccagtgtatttaac
actgacctgctctacaccattgagctgggttatggtttggatgtggccgaatgtatggcg
cattctgcgctcaatcgtaaagaatctcgtggtgcccaccagcgtttggacgaaggctgt
accgaacgtgatgacgttaacttcctcaaacacaccttagccttccatacgccgggtggt
gcaccgcgtattgaatacagcgatgtgaaaatcaccaaactggtaccggccaagcgggtc
tatggtggcgaagccaccgcccaagacgcgaaagacgcaaaagatgcacaagatttaaag
gataaggagcaagcgaatgactga
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