Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0873
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Entry
YPC_0873 CDS
T01874
Symbol
speA
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00330
Arginine and proline metabolism
yph01100
Metabolic pathways
yph01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
YPC_0873 (speA)
Enzymes [BR:
yph01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
YPC_0873 (speA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
ADV97562
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Position
886981..888960
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AA seq
659 aa
AA seq
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MSDDNLISRPLTAGAHVSLRSMQEVAMNDRNASKMLSTYNVAYWGGNYYDVNELGHISVC
PDPDIREARVDLAQLVKKMQLEQGQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGG
YFLVYPIKVNQHRRVIESLVNSGEPLGLEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREY
IRLALIGEKLGHKVYLVIEKMSEIKMVLEEAERLNVVPRLGVRARLASQGSGKWQASGGE
KSKFGLSATQVLQLVDMLREANSLESLQLLHFHLGSQLSNIRDISTGVRESARFYVELHK
LGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVIT
ESGRAVTAHHTVLVSNVIGVERNEFCEPQPPEAGAPRALESLWDTWQEMQEPENRRSLRE
WLHDSQMDLHDVHTQYAHGMLDLTHRAWAEQLYLSICNEIQKQLDPSNRAHRPIIDELQE
RMADKLYVNFSLFQSMPDAWGIDQLFPVLPLEGLDKPPERRAVLLDITCDSDGTIDHYID
GDGVATTMPMPPYDPENPPLLGFFMVGAYQEILGNMHNLFGDTAAVDVYVFPDGTVEVEQ
TDEGDTVADMLEYVQLNPEKLLEHFRGQVKETDLDTELQAQFLEEFEAGLYGYTYLEDE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgataacttgattagccgtccgttaactgcgggcgcacatgtttctttacgc
tccatgcaggaggtagccatgaatgatcgaaatgccagcaagatgctgagcacgtataac
gtcgcctactggggtggcaactattatgacgtcaatgaattaggtcatatcagtgtttgc
cctgatccggatattcgtgaggcgcgtgtcgatctggcgcaactggttaaaaagatgcag
ctcgaacaagggcaacgtttgcctgcgctgttctgcttcccacaaattttacagcatcgt
ctgcgttcaattaacgcggcgtttaaacgtgcgcgtgagtctttcggctatgaaggcggc
tacttcctggtttaccccattaaagtaaaccaacaccgtcgagtgattgagtctttggtc
aattccggcgaaccgttagggctggaagcgggttctaaagctgagatgatggcggtgctg
gcccatgctggcatgactcgttcggttatcgtgtgtaacggttataaagaccgtgaatac
attcgtttggctttgatcggtgaaaaactgggccataaggtgtatctggtcatcgaaaag
atgtcagaaatcaaaatggtcctggaagaagccgagcggctgaatgtggttccacgtttg
ggggttcgcgcccgcctggcatcacaaggttccggtaaatggcaggccagtgggggtgag
aagtccaaatttggtttgtctgcaacgcaggtattacaactggttgatatgctgcgtgag
gcgaatagcctggaaagtttgcaattactgcatttccacttaggttctcaactctccaac
atccgtgatatctccaccggcgtgcgtgaatctgctcgtttctatgtggagttacacaag
ctgggcgttaatatccagtgcttcgatgtgggcgggggcttgggcgtcgattatgaaggg
acgcgctctcaatctgattgctccgttaactatggcttgaatgaatatgccaataacgtt
atctggggtatcggtgatgcctgtaacgaacatggtttgccgcatcctaccgttattaca
gaatctggtcgtgcggttaccgctcaccatacggtattggtgtccaatgttatcggtgta
gagcgcaatgagttctgtgagccgcagccaccggaagcgggcgctccacgtgctttggaa
agtttatgggatacctggcaggagatgcaggaaccggaaaaccgccgttcactgcgcgaa
tggttgcacgatagccaaatggatttacacgacgtccatacccaatatgctcacggtatg
ctggatctgactcatcgcgcttgggcagagcaactttatctaagcatttgtaatgagatc
caaaaacagttggatccaagcaaccgcgcccaccggcccatcattgatgagctgcaagag
cggatggctgacaagctgtatgtgaatttctcgctgttccagtcaatgccggatgcatgg
ggtatcgatcaactgttcccggtcttgccattggaagggttagataagccgccagagcgc
cgtgcggtattgctggatattacctgtgattctgatggcaccatcgatcactatattgat
ggtgatggggtggcgaccaccatgccaatgccaccgtatgatccggaaaacccgccattg
ctaggcttctttatggtcggtgcttaccaggaaatcttgggtaatatgcacaacctgttt
ggtgacactgcggcggtagatgtttatgtcttccctgatggcacggtagaggttgagcag
accgatgaaggcgatacagtggcggatatgttggaatacgtccaattgaaccctgaaaaa
ttgctggaacatttccgcggtcaggtaaaagaaaccgatctggataccgaattgcaggcg
cagttcctggaagagtttgaggctggcttgtacggctacacatatcttgaagacgaataa
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