Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0958
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Entry
YPC_0958 CDS
T01874
Symbol
ganF
Name
(GenBank) membrane component of an ABC superfamily oligogalactan transporter
KO
K15771
arabinogalactan oligomer / maltooligosaccharide transport system permease protein
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YPC_0958 (ganF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yph02000
]
YPC_0958 (ganF)
Transporters [BR:
yph02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
YPC_0958 (ganF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF6677
DUF5683
COX14
Motif
Other DBs
NCBI-ProteinID:
ADV97642
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Position
965694..967001
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AA seq
435 aa
AA seq
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MIISSGDNGAAAKQSSRHAIAAVLCAVVPGFGQFYHRQWAKGLVFLVLISSFVGVFFDFL
QEGLWGLYTLGEEVPRDNSIFLLAEGIISVLIIGFGVALYYFSLRDAWVNGKKRDAGIPL
NSVRKQYQLLLSEGFPYLMITPGFILLVFAVIFPILFGFSIAFTNYNLYHTPPAKLVDWV
GFKNFVNIFTLSIWRSTFFDVLQWTVVWTLLATTLQCTVGVLLAILVNQKDLRFKPLIRT
IFILPWAVPGFVTILVFAGMFNDSFGVINNSILAFFGIAPKAWMTDPFWTKTALIMMQTW
LGFPFVFAMTTGVLQAIPDDLYEAATMDGASTSTKLRTITLPLVLYSIAPIIITQYTFNF
NNFNIIYLFNNGGPAVAGSNAGGTDILVSWIYKLTMSSSQYAIAATITILLSIFVVGLAL
WQFRATKSFKNDDMA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgattatcagttctggcgataacggagcggcagcaaaacagtctagtcgccatgccatt
gccgcggtgctgtgtgcggtagtacctgggtttggtcagttttatcatcgccaatgggca
aagggactcgtatttttagttctgataagcagttttgtcggcgtattttttgattttctg
caagaggggctctggggcttgtataccctcggagaggaagttccgcgtgacaactcaatt
ttcctgctggctgaggggataatcagtgtgctgattattggctttggcgtggcgctttat
tatttttcattacgcgatgcttgggttaatgggaaaaaacgtgatgcaggtattccgctt
aatagtgtgcgcaaacaataccaactcctgttaagcgaaggcttcccgtatttaatgatc
acccccggatttattctgttggtgttcgcggttattttcccaatcctatttggcttctcg
attgcctttaccaactacaacctttatcacacacctcccgctaaattggttgactgggta
gggtttaaaaactttgttaatattttcaccctgagtatctggcgttcaactttcttcgac
gtgctgcaatggaccgtggtatggacgctgctggcaacgacgttgcaatgtaccgtaggt
gtattgttggctattttggtcaaccaaaaagatctgcgctttaaacctttgatccgcact
atctttattttgccatgggcagtaccgggttttgtcaccatcttggtatttgcagggatg
tttaacgactcgtttggggtgattaataactctattctcgctttctttggcattgcgcct
aaagcgtggatgacggatccgttctggactaaaacggcgctcattatgatgcagacgtgg
ctgggtttcccgtttgtttttgccatgaccaccggggtattgcaggctattcccgacgat
ttatacgaggctgccaccatggatggcgcgagtaccagcaccaaattgcgcaccatcacg
ctgccgttggtcctttattctattgcgccgattatcatcactcagtacacctttaacttt
aataatttcaatattatttatttgtttaataacggtgggccggcagtggcggggtcaaac
gcaggaggcaccgatattctggtgtcgtggatctataaattgaccatgtcttcttcgcaa
tacgcaatagcagcaaccattactattttgctttccatctttgtggttggcctggcgttg
tggcaattccgcgcaacaaaatcatttaaaaatgatgatatggcataa
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