KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_1005
Entry
YPC_1005          CDS       T01874                                 
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yph00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YPC_1005
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yph02044]
    YPC_1005
Secretion system [BR:yph02044]
 Type II secretion system
  General secretion pathway protein
   YPC_1005
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ADV97682
LinkDB
Position
1011756..1013678
AA seq 640 aa
MYISGKGIKSIHGMIFLFTLIMPLDIISANFSVSFKDVDIKEFINSVSKNINKTIIIDPT
VQGLISIRSYENLDKDTYYQLFLNVLDVYGYAAIEMPHNVLKVISSKRAKGVVAPLPKEG
VTFDGDELINRVIPLRYISAKKITPLLRQLNDNTESGSIINYDPSNILLITGRAAVVNRL
HSIVTDLDQAGDNEIELYKLNYAIAADVVKIVNEAINPINNLKQEVSIVGKVIADERTNS
ILISGDTYIRKKSILMIKKLDKRQSSDGNTKVVYMKYAQASKLLDVLNGISEGFHNEKKT
KQSNQWNQRPVAIKAYDQTNALVITADPDMMLALGEVIEKLDIRRAQVLVEAIIVETQNG
EGINLGVKWENKRSDDINFIKNSDGLLNNNGWGIATTITGLTAGFYKGNWDVLLSALSTN
TNNNILATPSIVTLDNMEAEFNVGQEVPVLISTQTTTTDKVYNSISRQSIGVMLKVKPQI
NKGDSVLLEIRQEVSSIADSSTVNTHNLGSVFNKRVVNNAVLVKSGETVVVGGLLDKKSS
TIVNKVPFLGDLPLIGWLFRQTKEKVEKSNLILFIKPTILRESDDYSVVTSKEYNKYKKD
NMNGYTLADDIVLSDKKYLSVIPSIRKDINNFYTLLDSEL
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgtatattagtggcaaaggaattaaatctatccatgggatgatttttttattcactcta
attatgccattagacataataagtgctaatttttcagtctctttcaaagatgtggatata
aaagagtttattaattcagtaagtaagaatattaataaaactattatcatagatcctacg
gtccaagggcttatcagcattcgcagttatgagaatttggataaagatacgtattatcaa
ctattcttgaatgtgcttgatgtctatggttatgcggccattgagatgccacataatgtc
ctcaaagtgatttcatcaaaaagagccaaaggagtagtcgcaccgctcccaaaagagggg
gtaacattcgatggtgatgaattgataaatagagttattcctcttaggtacatatcagca
aagaaaataacgccattattgaggcaactcaatgataatacggagtctggcagtattatt
aattatgacccatctaatattttgttaattacagggcgtgctgcggtagtaaaccgtctg
cattcaatagttactgatcttgaccaagccggagataatgaaattgagctttataaactc
aattatgcgattgctgctgatgttgttaaaatagtaaatgaagctataaatccaataaat
aatttaaaacaagaagtatcaatagtaggaaaggttattgctgatgaaagaacaaactct
atattaatcagcggtgatacatatatcagaaaaaaatccattctaatgataaaaaaactc
gacaagagacaaagtagcgatgggaatacaaaagtggtttatatgaaatatgctcaagcc
tcaaagctattagatgtcttaaatggaataagcgaaggttttcataatgagaaaaaaaca
aaacaatctaatcaatggaatcagagacctgtagcaataaaggcatatgatcagacgaat
gcattagttattacggcagatcctgacatgatgctagccttaggagaagtaatagaaaaa
ttagatatcagacgtgcacaggttttggttgaggctattattgtcgaaactcaaaacgga
gaaggtattaaccttggtgttaaatgggaaaataagcgttctgatgatattaattttatt
aaaaattccgatggtttattaaataataatggatggggcatagctacgacaattactgga
ttaactgctggtttttataaaggaaactgggatgtattgcttagcgctttatcaacaaat
acaaataataatatactcgcaactcccagtattgttactctcgataatatggaggctgaa
ttcaatgtgggtcaggaggttccagtgctcatatcaacgcaaacgacaaccacagataag
gtatataattcaatttcaaggcaatctataggtgtcatgctaaaagtaaagccacaaata
aataaaggtgattcggttctacttgaaatcaggcaagaggtgtcgagtatcgctgatagt
tctactgttaatacacataatttagggtctgtttttaataaacgagtagtgaataatgca
gtattagttaaaagtggagaaacagttgttgttggtggattacttgataagaagtctagt
acgattgttaataaagtccccttcttgggtgatctcccattaataggatggctatttaga
caaaccaaagagaaggtggaaaaaagtaatcttattctatttataaaaccgacaatactt
agggaatccgatgactatagcgttgtgacgtcaaaagaatataataaatataaaaaagat
aatatgaatggatatactttagccgatgatatagtcctatcagataaaaaatatttaagt
gttattcctagtattaggaaagatataaataatttttatacactgttggactcagagcta
tga

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