Yersinia pestis Harbin 35 (biovar Medievalis): YPC_1128
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Entry
YPC_1128 CDS
T01874
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph03030
DNA replication
yph03430
Mismatch repair
yph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YPC_1128 (dnaQ)
03430 Mismatch repair
YPC_1128 (dnaQ)
03440 Homologous recombination
YPC_1128 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yph03032
]
YPC_1128 (dnaQ)
03400 DNA repair and recombination proteins [BR:
yph03400
]
YPC_1128 (dnaQ)
Enzymes [BR:
yph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YPC_1128 (dnaQ)
DNA replication proteins [BR:
yph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YPC_1128 (dnaQ)
DNA repair and recombination proteins [BR:
yph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YPC_1128 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADV97789
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All DBs
Position
1130561..1131325
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AA seq
254 aa
AA seq
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MIITPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRNFHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFADITPEFLDFIRGAELVIHNAAFDIGFMDYEFRMLQQDIPK
TETFCTITDSLLMARRLFPGKRNNLDALCDRYQIDNTKRTLHGALLDAEILAEVYLAMTG
GQTSLTFSMEGEVSQNNASEDIQRITRPASALKIIYATEDELANHESRLDFVMKKGGSCL
WRMPLEAEEETKAE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgatcattacaccgaccagacagattgttctggatactgaaactaccggtatgaataag
cttggcgttcattatgaaggccatcgtattattgaaatcggtgccgttgaagttatcaat
cgccgcctgaccggcagaaatttccatgtatatgtgaagcccgaccgtttggttgatcca
gaagcttacggggtgcacgggatcagcgatgagtttttggctgacaagccaacatttgct
gatattacgccggagtttttagattttatccgtggcgctgaattagtcatccataatgct
gcgtttgatatcggctttatggattacgagttccggatgttgcagcaagatattccgaaa
acggagaccttctgtactatcactgatagcctgttgatggctcgccgcttatttcccggt
aagcggaataaccttgatgccctgtgtgatcgctatcagatagataataccaaacgaacc
ttgcacggtgcgttacttgatgccgagattctggctgaagtttatttagcaatgactggc
gggcagacatcgctaactttctccatggaaggcgaagtgtcgcagaataacgcgtctgaa
gatattcaacgcattactcgcccagcatcggcattgaaaattatctatgctaccgaggat
gaattggctaatcatgaatcccgtttggattttgtgatgaaaaagggcggcagttgcctg
tggcggatgccgcttgaggcagaagaagagacaaaagcagaataa
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