KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_1471
Entry
YPC_1471          CDS       T01874                                 
Name
(GenBank) hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yph00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YPC_1471
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yph02044]
    YPC_1471
Secretion system [BR:yph02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YPC_1471
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp44-like_2nd DUF6484
Other DBs
NCBI-ProteinID: ADV98094
LinkDB
Position
1445544..1448129
AA seq 861 aa
MSRTINLSSPAMPYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPLIPWQAASNVDL
KSLIGKEMTIEMELDGNGLGDVRSVGKGTREITGLVERARYIGRDANQAIFEITIKPWFY
LANLTSDFKIYQNKNVVDIIEEVFSDYNFPFEKRLATTYPILDFQVQYGETDFNFLQRLM
EEWGIYWFFEHQDHKQKLILVDHVGAHKRSFSTAYHAIEYLSDEPKAGEEYITQFQTQET
LTSGTWVTNDYDFTKSRADILAMDSKPRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEE
RGALGSRAVGSGQLRGIVCGANFELKGFPVDKANREYMIISSRLTVAEVDQLSGGEDAFS
CESSFTVQPTTKIYRHPQVTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKVRFVWDRYGT
NSESDSCWLRVSQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWD
LPANATQSGMVSRTVGGGLTNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADS
VLNVGANRSEVVGANYNQDVLGTSMLAIGAASMLQVGLARSVVVGGAHSLNVVLANATNV
GGANMTNVGGFNGLAVGGAHQTAVGGAATLAAGGPIAIGAGGELILSGDIVKIVGKSKVI
IQGGEVHINSDDCCGRKTGNGGGAFGAFASLAGLLPLAGAIALPLPLPLLPIVVPPVTSP
PDPTVPPDPTLPPDPTLPPDPTLPPDPTLPPETTAPPETTAPPETTAPPETTAPPETTAP
PETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAPPETTAP
PETTAPPEPTRTPPGTQTPPP
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgtcaaggacaataaatttgagcagcccggctatgccttatctattgggtgagcctgcg
ctggtactgtctaagttggaaggcgaggaagccttttcgactttatattcttatactatt
acggcaaagacaccggctaacccattaattccttggcaagcggcttcaaatgtcgatctc
aaatccttaattggtaaagagatgacgattgaaatggaactggacggcaacggcctgggt
gatgtgagaagtgtaggtaaaggcacgcgtgaaattacggggctggttgagagagccaga
tacattggtcgagatgccaatcaggccatatttgagatcactattaagccttggttctac
ctggctaatttaacctctgactttaaaatttatcaaaataaaaatgtcgttgatattata
gaggaagtgttctcagactataattttccgtttgagaaacggttggctacaacctatccg
atattagattttcaggttcagtacggtgaaaccgactttaatttccttcagcgtttgatg
gaagagtggggtatttactggttctttgagcatcaggatcataaacaaaaattaattctt
gtggatcatgtcggtgcgcataaacgctcgttcagtaccgcctaccatgccattgagtac
ttgtcggatgagcctaaagcgggcgaagagtacatcacacaattccagactcaggaaacc
ttgacgagtgggacctgggtcaccaacgattatgacttcacgaaatcccgtgccgatatt
ctggcaatggacagtaaaccgcgtaaaaccagctttaacgatctcgagatttatcactgg
ccaggggattatgatcagccagatattggtgagcacctttcacgcgtgcgtatcgaagaa
cgtggtgctctgggttcgcgggcggtcggttctggtcaactgcgcgggatagtttgtggt
gctaacttcgagctgaaagggttccccgttgataaagcgaatcgggaatacatgattatc
tccagccgtttgacggtggctgaagttgatcaactgtctggcggtgaggatgcgtttagt
tgcgagagttctttcacggttcagccgacgaccaaaatctatcgtcacccacaggtgaca
ccaaaaccgaaaaccaatgggccgcaaaacgccattattgtggggccaccgggtgaagag
atttggaccgatgaatatggccgcgtaaaagtgcgtttcgtttgggatcgctatggcaca
aacagcgagtcagactcttgctggctacgtgttagccaggcttgggcagggaacagcttt
ggtgggatctatattccacgcattggtcaggaagtcattgttgactgtattaacggcgat
cctgaccggccaatggtgatgggcagcctttataataacgtgacgcgtcccccttgggac
ctgcctgccaatgcgacgcaaagtggcatggtcagtcgtaccgttggcggcgggttaacc
aactataacggcgttcgttttgaagataaatcggggctggagcagtactgggaacaggcc
gagcgcgatatgtcgcgtttgactaaaaataatgaaacgcaaattatcggtgccgattct
gtcctgaatgtaggggccaaccgaagtgaagttgtcggggccaattataaccaagatgtt
cttggcacatcaatgttagccatcggtgcagcctctatgctacaggtgggattggcgcgt
agcgttgtggttggcggagcacattcactgaatgtggttttggcgaatgccaccaatgtg
ggtggcgctaacatgaccaacgtaggggggtttaatggccttgcggtggggggagcccat
cagacagctgtaggcggtgctgcgacactggctgccggcggccctattgctattggggcg
ggtggtgagcttatcctcagtggggatatcgtaaaaattgttggtaaaagtaaggttatt
attcagggcggtgaagttcacattaactctgatgattgttgtggtcgtaaaacgggcaat
ggcggcggggcattcggtgcctttgcgagcctggcaggtttattgccgctggcgggtgct
attgccttaccgctaccgttacccttgttgccaatagtggtgccaccagtgacatcgcca
ccggatccaacagtgccaccggatccgacattgccaccggatccgacattgccaccagat
ccaacgttgccaccagatccaacgttaccgccggaaaccacggcaccgccggaaaccacg
gcaccgccggaaaccacggcaccgccagaaacaacggcaccgccagagacaacggcaccg
ccggaaaccacggcaccgccggaaacaacggcaccgccagagacaacggcaccgccagag
acaacggcaccgccagaaacaacggcaccgccggaaacaacggcaccgccggaaacaacg
gcaccgccggaaacaacggcaccgccggaaaccacggcaccgccagagacaacggcaccg
ccagagacaacggcaccgccggaaccgacgcgaacaccgccagggacgcagacgccaccg
ccttga

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