Yersinia pestis Harbin 35 (biovar Medievalis): YPC_2040
Help
Entry
YPC_2040 CDS
T01874
Symbol
ydiJ
Name
(GenBank) putative FAD-linked oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00310
Lysine degradation
yph01100
Metabolic pathways
yph01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
YPC_2040 (ydiJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_17
Fer4_20
BBS7_pf
Fer4_18
Fer4_21
Fer4_10
BBE
Motif
Other DBs
NCBI-ProteinID:
ADV98632
LinkDB
All DBs
Position
complement(2004524..2007580)
Genome browser
AA seq
1018 aa
AA seq
DB search
MIPQISQAPGVIQSVLDFLDALKQNGFTGDTATNYADRLTMATDNSIYQLLPDAVVFPRS
TADVALVGRLAGLESFKSLVFTPRGGGTGTNGQALNRGIVVDMSRHMNRILEINPEQGWV
RVEAGVIKDQLNQYLQPFGFFFSPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGL
RAIVLGGEMLDTQAMPTSLAETIAQEDSVVGRIYHTVLNRCREQRALILEKFPKLNRFLT
GYDLRHVFSDDLQTFDLTRILTGSEGTLAFITEATLDITPLPKVRRLVNVKYDSFDSALR
NAPFMVEAKALSVETVDSKVLNLAKEDIVWHSVKELITDVPDKEMLGLNIVEFAGDDAAL
IDTQMAALCQRLDELMSTRQGGVIGYQICSELAGIERIYGMRKKAVGLLGNSKGRAKPIP
FAEDTCVPPHHLADYIVEFRQLLDSHNLSYGMFGHVDAGVLHVRPALDMCDPQQERLMKQ
LSDQIVALTARYGGLLWGEHGKGFRAEYSPDFFGDVLYRELRRIKSAFDPDNRLNPGKIC
SPLGSDAPMMKIDSADKRGTLDRRIPLEVRTSFRGAMECNGNGLCFNFDAHSPMCPSMKI
TGDRIHSPKGRATLVREWLRLLSEQGVDPVALEKGLASKRPSLRGLIEKTRNSWQASQGV
YDFSHEVKESMSGCLACKACSTQCPIKIDVPGFRSRFLQLYHTRYHRPLRDYVVAGVESY
APLMAKAPKVFNFFLKQLWVRSLSQKSIGMVDLPMLSSPTLKQALSGHYASTMTLEQLEK
LSEQERRQHVLIVQDPFTSYYDAQVVADFVRLVEKLGFNPVLLPFSPNGKAQHIKGFLQR
FAKTARKTADFLNRIALLAMPMVGVDPALVLCYRDEYKEILGDARGDFTVQLVHEWLQTA
LADQPEQQISGEPWYLFGHCTETTALPGSSQHWATIFSRYGARLENVSVGCCGMAGTYGH
EAKNVENSLGIYALSWQQALQTLPGKRCLATGYSCRSQVKRIEGNGLRHPLQALLELV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacaaatttctcaggcaccgggtgtcattcagtcggtactggattttttggac
gctttgaagcaaaacggttttaccggcgatactgctactaactacgccgatcgcctgacg
atggctacggacaacagtatttatcaactgctccctgatgcggtggttttccctcgctca
acggcggatgtggcgctcgtcggccgcctggcagggctggagagttttaaatcattggta
ttcacgccacgcggcgggggaacgggaaccaatggtcaggcgttgaatcgcgggattgtg
gtggatatgtcgcgccatatgaaccgcattctggagattaacccagaacaaggctgggtg
cgggtcgaggctggagtgataaaagaccagcttaatcagtacttgcagccatttggcttt
ttcttctcaccggaactttctaccagtaaccgcgccacattagggggaatgattaacact
gatgcctccggtcaggggtcattggtgtatggcaaaacgtcagaccacgtcttgggttta
cgcgctattgtgctgggtggcgagatgttagacacccaggcaatgccgacgtcattggcg
gaaacgattgcgcaggaagactcggtggtggggcgtatttaccacaccgtccttaaccgt
tgccgtgaacagcgcgcattgattttagagaaattccctaaattaaaccgttttttgacc
ggttatgatttacgtcacgtgttcagtgatgacctgcaaacttttgatttaacgcggatc
ttaaccggatctgaagggacattagcttttattaccgaagctacgttggatattaccccg
ttgccaaaagttcgccgtttggtgaatgtgaagtatgactcctttgattcagccttgcgt
aatgcgcctttcatggtggaagcgaaagcattatcggtggaaacggttgattctaaagtt
cttaatttagccaaagaagatattgtttggcactcggtcaaagaactgatcactgacgtt
cccgataaagagatgctggggctgaatattgttgagtttgccggtgatgatgccgcgtta
atcgacacccagatggccgcgctgtgccaacgtttagatgagctaatgtccactagacaa
ggtggggtaattggttatcagatttgcagcgagttagccggtattgagcgtatctatggt
atgcgcaagaaagcggtgggcttgctcggtaacagcaaagggcgggcgaagcctattcca
tttgctgaagatacttgcgtacctcctcaccacttggctgactatattgttgaattccgt
caattgttagatagccacaatctctcgtatggcatgtttggccatgttgatgcgggggta
ttgcatgtccgtcccgcattggacatgtgcgatccacagcaagaaagactaatgaaacaa
ctctccgatcagatcgtagcactcactgcccgctatggtggcttgttatggggagagcat
ggcaaaggctttcgggcagaatacagccccgatttcttcggcgacgtgttataccgcgaa
ctgcgccgcattaaatcggcattcgatcctgacaaccgattgaatccagggaagatctgc
tcaccgttaggcagtgatgccccgatgatgaagatcgatagcgcagacaaacgcggtacg
ctggatcggcgtattccactcgaggtgagaacctcgttccgtggtgcgatggagtgtaac
ggcaacggtttatgctttaactttgatgcgcatagcccaatgtgcccatcaatgaaaatc
accggtgaccgcattcactccccgaaagggcgagccacgctggtgcgcgagtggttacga
ttactgtcagagcaaggtgttgaccccgtggctctggagaaaggattggcgagcaagcgg
ccaagtttgcgcggcctgattgaaaagacccgcaacagttggcaggccagtcaaggggtc
tatgatttctcacatgaagtcaaagaatccatgtctggctgtctggcgtgtaaagcctgt
tcgacacagtgcccgataaaaattgatgtgccggggttccgctcccgtttccttcaactg
tatcacacccgctatcaccgcccattacgtgactacgtagtggcaggggtggagagttat
gccccattgatggccaaggcacctaaggtctttaatttctttttgaagcaattgtgggtg
cggtcgttaagccagaaaagcattggtatggttgatttgcctatgctctccagcccaacg
ctgaagcaggcactctccggccattacgccagtaccatgacgctggaacaattggaaaaa
ctgagcgagcaagaacgccgccagcatgtgttgatcgtacaggatccatttaccagctat
tacgatgcccaagtggtggcggactttgtccggctggtggaaaagctgggttttaatccc
gtcctattgcctttttcacccaatggcaaagcgcaacatatcaaaggattcctacagcgg
tttgcgaaaacagcacgtaaaacagcggatttcctcaatcgtattgcgttattagctatg
ccgatggtgggggttgatcccgcgttggtgctctgttatcgcgacgaatataaagaaatt
ttgggcgatgcacggggtgatttcacggtgcaactggttcacgagtggttacaaacggct
ttggctgatcagccagagcagcaaatcagtggtgagccttggtatctgtttgggcattgc
actgaaacaacggcactacccggcagcagtcagcattgggccaccattttttcacgctat
ggtgcaaggcttgaaaatgtcagcgttggatgctgcggtatggccggaacatacggccat
gaggcgaagaacgttgaaaattccttgggtatctatgcgctatcatggcaacaggcattg
caaacattgccaggtaaacgctgcttagcgaccggctattcctgccgtagccaagttaaa
cgtattgaaggcaatggcctgcggcatccgttgcaagctttactcgagctggtgtga
DBGET
integrated database retrieval system
