Yersinia pestis Harbin 35 (biovar Medievalis): YPC_2554
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Entry
YPC_2554 CDS
T01874
Name
(GenBank) Raffinose operon transcriptional regulatoryprotein rafR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yph03000
]
YPC_2554
Transcription factors [BR:
yph03000
]
Prokaryotic type
Helix-turn-helix
LacI family
YPC_2554
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GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_3
HTH_8
Peripla_BP_4
HTH_24
HTH_38
HTH_AsnC-type
HTH_23
HTH_28
HTH_50
HTH_IclR
HTH_3
HTH_Tnp_ISL3
HTH_Crp_2
HTH_36
Sigma54_DBD
HTH_35
Motif
Other DBs
NCBI-ProteinID:
ADV99110
UniProt:
A0AAC8L2Q2
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Position
complement(2460338..2461225)
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AA seq
295 aa
AA seq
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MSLKKIANELGLSSTTVSRALNGYDDVAAETRERIIDAAKRLGYQPNSLARRLKMGRTDA
IALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDA
LIVAHTQPEDFRLQYLQKQNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQR
IAFVSTDARISYVDQRLQGYVQTMSEAGLMPLAGYLQKADPTRPGGYLAASRLLALEVPP
TAIITDCNMLGDGVASALDKAGLLGGEGISLIVTNGAIVIHTQRLKSDPGGNLLS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgaagaaaattgcaaatgagcttgggctgtcctccacaacggtaagccgcgcg
ttaaatggctatgatgatgttgcggccgaaacacgtgagcggattatcgatgcggccaag
agattgggttatcaaccgaattccttagctcggcggcttaaaatggggagaaccgatgcc
attgctttggcgtatccatcacgtccacgagtgttgaataattcgacatttttggaaatg
ataagttggataggtatcgaactcggaaaacggggtctcgatctgttgctcattcctgat
gaacctggtgagaaataccagtcacttatccacttggtggaaacgcgtagagtggatgca
ttgatcgtggctcatacccagcctgaagactttcggttgcagtatttgcagaaacaaaac
tttccttttttggcattggggcgtagccatttacccaagccatatgcatggtttgatttt
gataatcacgctggcgcttcgttggcagtgaagcggcttctcgaacttgggcaccagaga
attgcatttgtgagtaccgatgcaaggatttcatatgtcgatcagcgtttgcagggatat
gtgcagacgatgtccgaagcgggcctgatgccgttggcagggtatctgcaaaaagcggat
cccactcgtcctggcggttatcttgctgcctcgcgtttattggcgcttgaggttcctcct
actgccattatcaccgactgtaatatgctgggtgatggcgtggcgagtgcgcttgataaa
gcgggcttgttgggcggcgaggggatatcgcttattgtaacgaacggtgcaatagtgatc
cacacccaacgcctgaaatcagatccagggggtaatctgctctcctga
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