Yersinia pestis Harbin 35 (biovar Medievalis): YPC_2778
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Entry
YPC_2778 CDS
T01874
Symbol
ihfB
Name
(GenBank) integration host factor (IHF), DNA-binding protein, beta subunit
KO
K05788
integration host factor subunit beta
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yph03032
]
YPC_2778 (ihfB)
03036 Chromosome and associated proteins [BR:
yph03036
]
YPC_2778 (ihfB)
03400 DNA repair and recombination proteins [BR:
yph03400
]
YPC_2778 (ihfB)
DNA replication proteins [BR:
yph03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPC_2778 (ihfB)
Chromosome and associated proteins [BR:
yph03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
YPC_2778 (ihfB)
DNA repair and recombination proteins [BR:
yph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
YPC_2778 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
ADV99319
LinkDB
All DBs
Position
complement(2693867..2694151)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHVPAKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcaatctcacgtgcctgctaag
gtcgttgaggatgcagtgaaagaaatgcttgagcatatggctggaacactagctgaaggt
gagcgcattgagatccgcggatttggcagtttttctcttcactaccgtgctccgcgtgtt
ggccgtaatccaaaaaccggtgataaagttgaactggaaggtaagtatgttccacacttt
aagccaggtaaagaattgcgagatcgcgctaatatctacggctaa
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