Yersinia pestis Harbin 35 (biovar Medievalis): YPC_2886
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Entry
YPC_2886 CDS
T01874
Symbol
nfo
Name
(GenBank) endonuclease IV with intrinsic 3'-5' exonuclease activity
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YPC_2886 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yph03400
]
YPC_2886 (nfo)
Enzymes [BR:
yph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
YPC_2886 (nfo)
DNA repair and recombination proteins [BR:
yph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
YPC_2886 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADV99415
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All DBs
Position
2800380..2801237
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AA seq
285 aa
AA seq
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MKFVGAHVSAAGGVDQAVIRAHELEATAFALFTKNQRQWRAAPLAEDVIEKFKLACEKYG
YTSAQILPHDSYLINLGHPVTEALEKSREAFIDELVRCQQLGLSLLNFHPGSHLLQIDED
QCLARIAESINIALDATEGVTAVIENTAGQGSNLGFKFEHLAAIIERVEDKSRVGVCIDT
CHAFAAGYDLRTEEDCEHTFAALGKIVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDSRFDNIPLILETVNMDIWAEEIAWLKSQAEIEPSL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtcggtgcacatgtcagcgcagcgggtggtgtagatcaagcggtaattaga
gcgcatgaacttgaggccacggcctttgcgctgtttaccaagaatcaacgtcaatggcgg
gccgcccctttagcggaagacgtaattgagaaatttaaactcgcgtgtgagaagtacggc
tatacctcggcacaaattctgcctcacgatagttacctgattaatctcgggcacccagtc
accgaggcactggaaaaatcccgtgaagcctttatcgatgagttagttcgctgccagcaa
ctggggttatcattactgaacttccatcccggtagccatttactgcaaattgatgaagac
caatgcttggcgcggattgccgaatcgatcaacatcgcgttagacgccactgaaggcgtg
actgcagtaattgaaaataccgcaggccagggcagtaacctgggctttaagtttgaacat
ttagccgccatcattgaaagagtggaagataaaagccgcgtcggcgtctgtattgatacc
tgccatgctttcgccgctggctatgatttacggactgaagaagattgtgagcacaccttc
gcggcattgggcaagatcgtcggcttccagtatctgcgtgggatgcatcttaatgatgcg
aaaagcgaatttaacagccgggttgaccgccaccacagcctgggtgaaggcaatattggc
aaaaccgtattcagctatattatgcgcgactcacgtttcgataatatcccattgattctg
gaaacggtgaatatggatatctgggccgaagagatcgcctggctgaaatcacaggcagag
attgagccctcgttgtaa
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