Yersinia pestis Harbin 35 (biovar Medievalis): YPC_3059
Help
Entry
YPC_3059 CDS
T01874
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YPC_3059 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yph03400
]
YPC_3059 (xseA)
Enzymes [BR:
yph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
YPC_3059 (xseA)
DNA repair and recombination proteins [BR:
yph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YPC_3059 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADV99577
LinkDB
All DBs
Position
2957348..2958727
Genome browser
AA seq
459 aa
AA seq
DB search
MSQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNFSQPASGHWYFTLKDDRAQVRC
AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ
LAAEGLFDQSHKQPLPHPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD
APLQIVRAIQLANLRAECDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQQFTRLE
HRLQQQHPHLRLARQQTLLLKLQRRLEESAQTQIRLLSKRTERLQQRLQQVQPQGQIHRY
NQRVQQQEYRLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTT
KQVQAGDKLTTRLQDGWVESEITQVTVAKKSRQKKVVTQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatcttccgcctcctcaatttttactgtcagccgcctgaatcagacggtacga
gaactattggaaagggaaatgggccagatttggctcactgccgagatttctaatttctct
cagcccgcttctgggcactggtatttcacgctgaaagatgatcgggcgcaagtgcgctgt
gccatgtttcgtaacagcaaccgccgcaccactttccgtccgcagaatggccaacaagtt
ttggtcagggcatcaattaccctgtatgaaccccgtggtgattatcagttaattgcggaa
agtatgcagcctgccggtgatgggttgctgcaacaacaatttgaacagcttaagcaacaa
ttagcggccgaagggctgtttgatcaaagccacaaacagccactccctcaccccgccaaa
caagtgggcgtaataacgtctgccagtggggctgcgctgcatgatgtgctgcatgtgtta
cagcgccgtgatccatcgcttccagtaattatttatcccacatcagtacagggcgttgat
gcgccattgcagatagtccgtgcgatccagttggcgaacttacgtgctgaatgcgatgta
ttgattgttggccgcggtggcggatcgctagaagatttgtggagtttcaacgacgaacgg
gttgcccgcgctatctttaacagccatatccctatcgtcagcgctgtcggccatgaaacc
gatgtcactattgccgattttgttgctgatttacgcgccccaaccccttcggctgccgcc
gagctagtcagtcgcaatcagattgagctcgttcgtcagattcaagggcaacagcaacga
atggaaatggcgatggattactatctggcgcaacgcaaccagcaattcacccgccttgaa
caccgtttgcagcaacagcatccgcatttacgtttagcccgtcagcaaacattgttgctg
aaattacaacgtaggctggaagagagtgcacaaacacagatccgcttattaagtaaacgt
accgagcggctgcaacagcgtttgcagcaagtgcagcctcaggggcaaattcaccggtat
aaccagcgggtacagcagcaagaataccgtttacgtcaagctgtagagcgccagctcaat
ggctatcgccaacgctttggtatcgcctgctcccagctagaggccgtgagcccactggca
acactggcccgtggctacagcgtgacacagacgccagcaggggcgttattgaagaccacc
aagcaagtacaggccggtgataaactgaccacccggttgcaagacggttgggtggaaagt
gagattacccaagtcaccgtagcgaagaaaagccgtcagaaaaaagtagtgacgcagtga
DBGET
integrated database retrieval system
