Yersinia pestis Harbin 35 (biovar Medievalis): YPC_3722
Help
Entry
YPC_3722 CDS
T01874
Symbol
mrcB
Name
(GenBank) bifunctional glycosyl transferase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00550
Peptidoglycan biosynthesis
yph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YPC_3722 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
yph01003
]
YPC_3722 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yph01011
]
YPC_3722 (mrcB)
Enzymes [BR:
yph01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
YPC_3722 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YPC_3722 (mrcB)
Glycosyltransferases [BR:
yph01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
YPC_3722 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
yph01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
YPC_3722 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ADW00166
LinkDB
All DBs
Position
complement(3579022..3581496)
Genome browser
AA seq
824 aa
AA seq
DB search
MSGDDREPIGRKGKKAQPKAAPKRPLRRRRDEDEYEEDYDEEQNDYDDEEEPMPRKVASR
PPRKKRRWLGLLIKLFLIGAVALAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNLEPGM
SYSKKEMIALLEGMQYRQVSRMTRPGEFTVQNDSIDILRRPFDFPDGKEGQIRARLLFKN
DRLAQIQNLDNQRDFGLFRLDPKLITMLQSPNGEQRLFVPRAGFPDLLVDTLLATEDRHF
YEHDGVSPYSIARAVVANLTAGKAVQGGSTLTQQLVKNLFLTNERSLVRKLNEAYMALLM
DYRYSKDRILELYLNEVYLGQSGGDQIRGFPLGSLYYFGRPVDELSLDQQAMLVGMVKGA
SLYNPWRNPKLALERRNLVLRLLQNQGIIDAELYTMLSARPLGVQPKGGVITPQPAFMQM
VRQELQQKLGNKVNDLSGVKIFTTLDPVSQDAAEKAIEDGVPALRAARNMNDLEAAMVVV
DRFSGEVRAMVGGSQPQFAGFNRAMQARRLVGSLAKPPTYLAALSEPDKYRLNTWLSDQP
LSLKLSNGSLWQPKNYDRQFRGQVMLMDALVNSLNIPTVNLGMSVGLDQISATLQRLGIP
KSVINPVPAMLLGAIDLTPVEVAQEYQTIASGGNRAPLSAVRSVIAEDGTVLYQSFPQAE
RMVPAQASYLTLYAMQQGVVRGTSRSLSAKFGKYNLAAKTGTTNDLRDSWFAGIDGKEVT
IAWIGRDNNGPTKLTGASGALTLYRRYLENQTPLPLILQPPEGISQMNIDSAGNFVCGEG
SGMRVIPVWTENPQALCQGSTPTQDPTKPNDDGVADWIKEMFGQ
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggacgatcgtgagccgatagggcgcaagggcaagaaagcccaacccaaagca
gcaccaaaacgtccactgcgccgtcggcgtgatgaagatgaatacgaagaagattatgac
gaagaacaaaatgattatgatgacgaggaggaaccgatgccaagaaaagtagcatcacgc
ccacctcgcaagaaacgccgttggctcgggttgttgatcaaactgttcctgattggggcc
gtggctttggcgatctatggggtttacctcgattcgcaaatccgcagccgtattgatggc
aaagtctggcaattaccggctgccgtgtatggccgcatggtcaatcttgagccgggtatg
tcctacagcaaaaaagagatgatcgccttgctggaagggatgcaataccgtcaggtcagt
cgcatgacccgccctggggagttcacggttcagaacgacagtatcgatatcttgcgccgg
ccgttcgatttccctgatggtaaagaaggccaaattcgcgcccgtttactgttcaaaaat
gatcgtctggcccagattcaaaacctggataatcagcgtgatttcgggctattccgcctc
gatcccaagttgattaccatgctgcaatcacctaacggtgaacagcgtctgtttgttccg
cgcgccgggttccctgatttgctggtggacaccttgctggcgactgaagaccgccatttc
tatgagcatgatggcgtcagcccgtattccattgctcgagccgtggtcgctaacctgaca
gccggtaaagcggtgcaggggggcagtacgctgacgcaacagttagtgaaaaacctgttc
ctgaccaatgaacgttcgctggtacgtaaacttaacgaggcctatatggccctgttgatg
gattatcgctacagcaaagatcggatcttggaactctatctgaacgaagtctatcttggt
cagagtggtggtgaccaaatccgtggcttcccgctgggtagcttgtattactttggccgc
ccggttgatgaattgagtctcgatcagcaagccatgttggttggcatggtgaaaggggcc
tcactgtataacccgtggcgtaatcctaagctggcacttgagcggcgtaatttggtcctg
cgcttgttgcagaatcaagggattatcgatgctgagctttacaccatgctcagtgcccgt
ccgctgggggtgcagccgaaaggcggagtcatcacacctcaacctgcttttatgcagatg
gtgcgccaggagctgcaacagaagttgggtaacaaggtcaatgatctgtctggcgtgaag
atcttcaccaccttggatccggtttcacaagatgccgcagaaaaagccatcgaagacggt
gttccggcgctgagagccgcccgtaatatgaatgacctggaagcggcgatggtggtggtt
gaccgtttcagtggcgaagtgcgtgccatggtgggcggttcacagccacaatttgccggt
tttaaccgtgcgatgcaggcccgccgtttggtggggtcacttgccaaaccaccaacctat
ctggccgcgttgagtgagccggataagtaccgcctcaatacctggctttcggaccaaccg
ctgtcgcttaaattgtcgaacggttcattgtggcagccgaaaaactatgatcgccagttc
cgtggtcaggtcatgttgatggatgcgttggtgaactcactgaacatcccaacagtcaat
ttggggatgtcagtgggcttagatcagatcagcgccacactgcaacgccttgggatcccg
aaatcagtcattaatccggtcccagccatgttattgggggcgattgacctgactccggtt
gaagttgcgcaggagtatcagacaatcgccagtggtggcaaccgtgcaccgttgtcggct
gtgcgttcggttattgctgaggatgggaccgtgctgtatcagagcttcccacaggcagaa
cgtatggtgcctgcacaagcttcttacctgacgctgtatgcgatgcagcaaggggttgtc
cgtggtacatcacgctctctctcggcgaagttcggcaaatataatctggcggccaaaacc
gggacaaccaacgatctgcgtgacagttggtttgccggtattgatggcaaagaagtgacc
attgcctggattgggcgcgacaataacggcccgactaagctgaccggggccagcggcgcg
ctaaccttgtatcgccgctatctggaaaaccaaacgccgttgccgctgattctgcaaccg
ccagaaggcattagccaaatgaacattgattcggcggggaacttcgtctgtggtgaaggg
agcgggatgcgcgtcattcctgtttggaccgaaaatccgcaagctttgtgtcagggatca
acacccactcaagaccccacaaaacctaacgatgatggtgttgccgattggatcaaagag
atgtttggccaataa
DBGET
integrated database retrieval system
