KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_3764
Entry
YPC_3764          CDS       T01874                                 
Symbol
hofC
Name
(GenBank) putative type II secretion system protein
  KO
K02505  protein transport protein HofC
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:yph00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yph02044]
    YPC_3764 (hofC)
Secretion system [BR:yph02044]
 Type II secretion system
  Type IVa pilus homolog protein
   YPC_3764 (hofC)
SSDB
Motif
Pfam: T2SSF SUR7 Virul_fac_BrkB TrbC COG3_N DUF996 DUF502 NADH5_C DUF3671 DUF2207_C Cyt_bd_oxida_II
Other DBs
NCBI-ProteinID: ADW00205
LinkDB
Position
3622149..3623348
AA seq 399 aa
MSRHRLFNWTALNKTGELQTGMLLATERNSVYEHIIQHGLQPLGVKGGRRLSARYWQGER
LVAMTRQLATLLQAGLPLVNSLQLLAKEADDSAWRCLLDEISQQVAQGQSLSEVMEQYPH
VFPRLYPPVVAVGELTGNLEQCCTQLVHHQERQQNLHKKVIKALKYPVVVCIVALVVSVI
MLVMVLPEFAQIYQSFDTPLPGLTASLLWLSTFLTFYGPYLALIIAIVCIGYFYTLRKKS
RWQQWEQTILLSIPLVSTLIRGSCLSQIFQTLAITQQAGLPLSAGLDAAARSIHNYNYQQ
ALRCIQKQISQGIPLYTTLNQHPLFPAICQQLIRVGEESGSQDVLLEKLACWHQQQTQNL
ADNVTQMLEPLLMLIIGSIVGVLVIAMYLPIFQLGDVIG
NT seq 1200 nt   +upstreamnt  +downstreamnt
ttgagccgccatcgtttattcaattggacagctctcaacaaaacaggggagctacagacg
ggcatgctactggcaactgagagaaacagtgtctatgaacatatcatccaacatggctta
cagcccctaggcgtgaaagggggaaggcggttatctgcacgctactggcaaggggaacgg
ttggtggcaatgacccgccaattagcgactttattgcaagcgggtttaccgttggtcaac
agtttacaattattggcaaaagaggcagatgactcagcatggcgttgcctattagatgag
ataagtcagcaagttgcacaaggccagtcactctcggaagtgatggaacagtatccacac
gtattcccccgactgtatcctccagtggttgccgtcggggagcttacgggtaatcttgag
caatgttgtactcaattagtacaccatcaggaacggcagcaaaatttacacaaaaaagtc
ataaaagcgctgaaataccccgttgtggtctgcatcgtcgcattggtagtcagtgtcatt
atgttagtcatggtgttacccgaatttgcacaaatatatcaatcgtttgatacccccctg
ccggggctaactgcaagcttactgtggctatcaacttttctcactttttatggcccctat
ctggcgctgataatagcaatagtgtgtattgggtatttctatacattacgaaaaaaatct
cgctggcagcaatgggaacagaccattctattaagcattcccttagtctcaacattaatc
cgtggtagctgcctcagccaaatttttcaaacgttagctatcacacaacaagccgggcta
cccctgtcagccgggttagatgcagcggctcgatccattcacaactacaattatcagcaa
gccttaaggtgtattcaaaaacaaattagccaaggtataccgctgtataccactcttaat
cagcaccctttatttcctgccatttgtcagcagctcattagggttggtgaagaatcaggc
tcacaggatgtgttgctggaaaagttagcctgttggcatcagcaacaaactcagaatttg
gcagataacgtcactcaaatgctagagccacttcttatgctgattattggcagtattgtc
ggcgtactggtgatcgccatgtatttacccatattccagttaggtgatgttattggataa

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