Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4115
Help
Entry
YPC_4115 CDS
T01874
Symbol
nhaR
Name
(GenBank) DNA-binding transcriptional activator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yph03000
]
YPC_4115 (nhaR)
Transcription factors [BR:
yph03000
]
Prokaryotic type
Helix-turn-helix
LysR family
YPC_4115 (nhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ADW00536
LinkDB
All DBs
Position
complement(3980991..3981890)
Genome browser
AA seq
299 aa
AA seq
DB search
MRMSHINFNHLYYFWQVCKEGSVVGAAEALFLTPQTITGQIKALEGRLGGKLFKRRGRGL
VPSELGQLVFRYADKMFMLSQEMLDIVNYRKESHLLFDVGVADALSKRLVSQVLETAVVE
HEKIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSSQQEGLFSVKLGECSVSFYCRQPV
PDLPFPASLQQKRLLIPGRRSMLGRKLLNWINSKGLKVEVLGEFDDAALMNAFAVYHDAI
FVAPTIYAADTYANDSEIIEIGRLDNVQEEYYVIFAERMIQHPAVQRVCNKDFSALFNC
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgtcacatattaatttcaatcatctttattatttttggcaggtttgtaaagaa
ggctcggttgtgggagccgcagaggcactgtttctgactccgcaaacaatcaccggccaa
attaaagcgctggaagggcgcttaggcggtaagctatttaagcggcgggggcggggattg
gtcccttcagaattggggcaactggttttccgctacgcggataaaatgtttatgcttagc
caggaaatgctggatatcgttaactaccgtaaagaatcccacctgttattcgatgtcggc
gtcgccgatgcattatcgaagcgtttagtgagtcaggttctggaaactgcggtggttgag
catgaaaaaattcatctacgctgttttgaatccacccatgagatgttgttagaacaactc
agtcagcacaaattggatatgatcttgtctgattgcccggttgactccagtcagcaagag
gggttgttctcagtgaaactgggggaatgcagtgtcagtttctattgtcgccagcctgtc
cccgatctacctttccctgccagtttgcagcaaaagcgtttattgatccccggtcgccgc
tcaatgttagggcgaaaattactcaactggattaacagtaaaggcctgaaggtagaggtt
ttgggggaatttgacgatgctgccctgatgaatgcgtttgctgtctatcatgacgctatc
tttgtcgcaccaacgatatacgccgctgatacttatgctaacgatagtgaaattattgaa
attggtcgtttagataacgtacaggaagagtactacgttatttttgctgagcggatgatc
caacatccggcagtacagcgggtatgtaacaaagatttttcagcgttgtttaactgttaa
DBGET
integrated database retrieval system
