Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4291
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Entry
YPC_4291 CDS
T01874
Symbol
kdsD
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00541
Biosynthesis of various nucleotide sugars
yph01100
Metabolic pathways
yph01250
Biosynthesis of nucleotide sugars
Module
yph_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
YPC_4291 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yph01005
]
YPC_4291 (kdsD)
Enzymes [BR:
yph01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
YPC_4291 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
yph01005
]
Lipid A
YPC_4291 (kdsD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
DUF2529
SIS_2
Motif
Other DBs
NCBI-ProteinID:
ADW00691
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All DBs
Position
4149493..4150479
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AA seq
328 aa
AA seq
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MSTFDLQPGVDFQQAGKQVLQIEREGLAQLDQYINEDFSRACEAIFRCHGKVVVMGMGKS
GHIGCKIAATFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLK
RQKILLICMSSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLK
ARGFTQEDFALSHPGGALGRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLT
VICDDSMRIKGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESR
HITALLVADGDQLLGVVHMHDMLRAGVV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttttgatttacagccgggcgtggatttccagcaggcaggtaagcaggtactt
cagattgaacgcgaagggctggctcaactcgatcaatacataaacgaggatttctccaga
gcctgtgaggccatttttcgttgccacggcaaagtcgtcgtgatgggaatgggcaaatct
ggtcatattggctgcaaaattgcagccacattcgccagcacgggcacacctgcatttttt
gtccatcctggtgaagccagccatggcgatttgggcatgatcacgccacaagatattgta
ttagctatctctaactctggggaatccaacgaaatcctcacgttgatccccgtgcttaag
cgccagaaaattctgttgatttgcatgagcagtaaccctgagagcaccatgggtaaagcg
gccgatattcacttgtgcattaatgtgccacaagaggcctgtccgctggggctagcgcca
accaccagtacgactgcaacactggttatgggggatgcgttggcggtagccttgctcaaa
gcacggggtttcacgcaggaagatttcgcactctctcacccaggtggcgcgctggggcgt
aagttgctgctgcggatcagcgatattatgcatacgggtacggagatccccaccgtcagc
cctgatgcatcattacgtgatgccttgctagaaattactcggaaaagtctgggtttgacc
gttatttgtgacgattcaatgaggattaaaggtatctttaccgacggtgacttgcgccgg
gtatttgatatgggcattgatctgaataatgcaaaaattgctgacgtcatgactcgcggg
ggtattcgagtccctccgaacatattggcggtggacgcgctcaatctgatggagtcacgc
catatcactgcgttgctcgtcgctgatggtgaccaattactgggtgtcgtacatatgcac
gatatgctgagagccggtgttgtctga
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