Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4296
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Entry
YPC_4296 CDS
T01874
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph02020
Two-component system
yph02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPC_4296 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YPC_4296 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yph03021
]
YPC_4296 (rpoN)
Transcription machinery [BR:
yph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YPC_4296 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ADW00696
LinkDB
All DBs
Position
4153174..4154607
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AA seq
477 aa
AA seq
DB search
MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIDAKE
TVDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMGNDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFTETDAAIATSIVDAVDDTGYLTVPLEDILESMGDENVALDEVEAVLK
RIQHFDPIGVAARNLRECLLVQLSQYAKDTPYLAEARLIVSEYLDLLGNHDFRMMIRLSR
LKEDTLKEAIALIQSLDPRPGQSINTGESEYVIPDVLVRKEKGIWTVELNADSIPRLKVN
QQYAAMGNSVRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVEFFEKGAE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtctgcaactcaagttcagccaacaactggcgatgactccgcagcttcag
caagctattcgcttgttgcaactttcgacgcttgaactccagcaggagattcagctcgcg
ctggagagcaacccccttcttgagcaaacggaccttcatgaagagatagatgctaaggaa
accgtggacagtgaatcgctggatacccgcgaagcactagaacaaaaggatatgccggaa
gaattaccgctagatgccacctgggatgagatttacaccgcaggtaccccatccggcatg
ggcaatgattacagtgacgatgaactgcccgtctatcagggtgaaaccacccaaacactg
caagactatctgatgtggcaggtggatttaacaccgttcactgagaccgacgccgccatt
gcgacttctatcgttgacgctgttgatgacactggctatctcactgtgccgctggaagat
attctggaaagcatgggtgatgagaacgtagcgctagacgaagtggaagcggtactcaaa
cgtattcagcattttgatcccatcggtgtcgctgcccgtaacttgcgcgaatgcttgctg
gtacagttatcacaatatgccaaagacaccccttatttggccgaagcgcgtctgatcgtc
agcgaatatttagatttgctaggcaaccatgatttccgcatgatgatccgcttgagtcgg
ctgaaagaagatacacttaaagaagccatcgcgctgatccaatcactggatccacggcca
ggtcagtcgatcaataccggggagtctgagtatgtcatcccggatgttctggttcgtaaa
gagaaaggtatctggacggtggagctgaatgccgatagcatcccacgtctaaaagttaac
caacaatacgcagcgatgggcaatagcgtccgtaatgacagtgacgggcagtttatccgt
agcaatttgcaagaagcaaaatggttgatcaaaagccttgaaagccgcaatgaaacgctg
ctaaaagtagcaagatgtattgtagaacagcaagtcgagttctttgagaaaggtgcagag
tttatgaaacccatggtactggctgatatcgcccaggctgtggatatgcatgaatcaaca
atctctcgagtgaccacgcagaaattcttgcacagtccccgagggatttttgaactgaag
tatttcttctctagccacgtcaataccgatagtgggggcgaagcctcttctacggcgatc
cgggcgctggtgaagaaattagtggcggcagaaaaccctgccaagccattaagcgatagt
aaactaaccactttattatgtgaacaaggcattatggtagcacggcgcaccgtcgcaaaa
taccgagagtcgttatccatccctccgtctaatcaacgtaaacagttggtttga
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integrated database retrieval system
