Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4338
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Entry
YPC_4338 CDS
T01874
Symbol
rng
Name
(GenBank) RNase G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yph03019
]
YPC_4338 (rng)
03009 Ribosome biogenesis [BR:
yph03009
]
YPC_4338 (rng)
Messenger RNA biogenesis [BR:
yph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPC_4338 (rng)
Ribosome biogenesis [BR:
yph03009
]
Prokaryotic type
rRNA processing factors
YPC_4338 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ADW00736
LinkDB
All DBs
Position
complement(4202148..4203617)
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AA seq
489 aa
AA seq
DB search
MTAELLVNITPSETRVAYIDGGILQEIHIEREAKRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKNFNVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVLMPGAAHVGVSQRIESEAERERLKKTVAAYCDEQGGFIIRTAAEGIGEE
ELSADAAFLKRLWTKVQERKKRNITKYKLYGEMALAQRVLRDFAGAALDKIRVDSKLTYD
LLVEFTREYIPEMTDKLELYTGKQPIFDLYDVENEIQRSLERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRMRNLGGIIIIDFIDMSNEDHRRRV
LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESIEHVLCHECPTCRGRGTVKSVETV
CYEILREIVRVHHAYDSDRFLVYASPAVGEALKGEESHALAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaattactggtcaatattacaccgtctgaaacgcgtgttgcttatattgat
ggcggcatcctgcaagaaatacatatcgagcgtgaagccaaaagagggatcgttggcaat
atttataaagggcgagtcagccgggttttaccgggtatgcaagctgcttttgttgacata
ggtctggataaagccgccttcctccatgcttccgatatcatgccccacaccgaatgcgtg
gccggggatgaacagaaaaacttcaatgtgcgcgatatcgccgaactggtccgtcagggg
caggatttaatggtacaagtggtgaaagatcccttgggtaccaaaggcgcacgtttgaca
accgatattactcttccttctcgctatctggtgttaatgcccggagctgcccatgttggg
gtttcccagcggattgaaagtgaagcagagcgcgaacgcctaaaaaagacggtggcagct
tactgtgatgagcagggcggttttattattcgtactgccgctgaagggattggcgaagaa
gagctatccgccgatgccgcgttccttaaacgtttgtggaccaaagttcaggagcgtaag
aagcgtaatatcaccaaatataagctgtatggtgaaatggcgctggcgcaacgcgtattg
cgtgattttgctggtgcggcgctggataaaatccgcgttgactcaaaattgacttacgat
ttgctggtggagttcacccgcgaatatattccagaaatgacggacaagctggagctgtat
actgggaagcaacctattttcgatctctatgatgtcgagaatgaaattcagcgctctctg
gagcgtaaagttgaattaaaatcaggtggttatctgattatcgatcagacagaagcgatg
actaccgtggatattaacactggggcatttgtcgggcatcggaatcttgaggaaaccatt
ttcaataccaatattgaggcgacgcaggccattgcccgccaattgcggatgcgtaatctg
ggcgggattatcattattgatttcattgatatgagtaatgaagatcatcgccggcgggta
ttgcattcattggaacaagcactgagtaaagatcgcgtaaaaaccagtattaatggcttc
tcccagctaggcttagtcgaaatgacgcgtaagcgtacgcgtgaaagtattgagcatgtt
ttatgccatgaatgcccaacctgccgtggccgtggcacggtaaaatccgtagagaccgtg
tgctacgaaatcttgcgtgaaattgtccgtgttcatcatgcttatgattctgaccgtttc
ttggtctatgcttctccggctgtaggtgaggcgctgaaaggcgaagagtctcatgcactg
gccgaggtggaaatcttcgtcggtaagcaggtaaaagttcagatagagccactgtataac
caagaacagtttgacgtggtgatgatgtaa
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