Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4343
Help
Entry
YPC_4343 CDS
T01874
Symbol
yhdA
Name
(GenBank) putative exported protein
KO
K18765
RNase E specificity factor CsrD
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yph03019
]
YPC_4343 (yhdA)
Messenger RNA biogenesis [BR:
yph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
YPC_4343 (yhdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
RH1
Claudin_2
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ADW00741
LinkDB
All DBs
Position
complement(4207278..4209194)
Genome browser
AA seq
638 aa
AA seq
DB search
MRFTTKLSAFMTLLVVLAMCLVLLGSTISFFYLCQKKMEQRLQSIVTAYDQSLLLQPINK
KREWLPLMMQTLGVVDVSVKNSTSTLYQLHIPAVYTPWNSHSRYRQMVLPLLHQPGTEMH
FNYIDPLGSYARSIYAAAILSLVVVVIALTLLLSFRWLRDQTVGQEKLERRARRILNGER
EHAVRSEDYEWPPCASRAIDHLLSELMEVRAERNRVDTLIRTFAAQDAQTGLSNRQFFDN
QLTTQLEETGAHGVVMMVQLPDFEALNETHDQQQVQELMSSLVNLLSTFVARYPSALLAR
YLNSDIAILLPHKTLKDADVMAAQLVNAVRTLPEPHIIDRESLLHIGIVAYRSGESVEQI
MDNAGQATKSAALYGGNGWYVFDTQVPERGRGSVKWRTLLEQTLASGGPRLYQKPVITVD
GKISHREIISRIYDGEQELLAAEFMPLVQLLGLGERYDRQKIDKIIPLLSLWPDETLAFS
ISVDSLLHRPFQRWLRDTLLQCKKSDRMRIIFELAEADVCQHIEEIRQMVRLLRGVGCKV
MASQAGLTVVSTSYIKSLQVEMIKLHPGVVRSINFRYENQLFVESLTGACAGTQTKVFAA
EVRTREEWQTLQEKGVYGGQGNFFAPPTPLNSGKKKYS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttaccaccaaactttctgcgtttatgacgctgctggtcgtattggctatgtgt
ttagtcttattgggcagcacgatcagcttcttctatttgtgccagaagaaaatggaacaa
cggctccaaagtattgtgaccgcttacgatcagtcactgctgctgcaacccatcaataaa
aaacgtgaatggctgccactgatgatgcagacccttggtgtggtcgatgtcagtgtcaaa
aatagcaccagtaccctctatcaactccacattcctgcagtttatacgccttggaacagc
cacagtcgctaccgtcagatggtattgcctctgttgcatcagccagggacggagatgcat
ttcaactatattgacccgttgggtagctatgcccgttctatttatgccgcggccatttta
tcactggtggtggtggtcattgcgttaacgttgttgttgagtttccgctggctacgtgac
cagaccgtggggcaggaaaaacttgaacggcgagcaaggcgcattctcaatggtgaacgt
gaacatgcggtgcgcagcgaggattacgaatggccaccttgtgccagcagggctattgac
catttattatctgagttgatggaggtgcgggcagaacgcaatcgggtagatacgttaatc
cgcacgtttgcggctcaagatgctcagactggcctcagtaaccgtcagttttttgataac
caactgaccacacaacttgaagagaccggtgcgcacggtgtggtcatgatggtgcaactg
cccgattttgaagccttaaatgaaacgcatgatcagcagcaagtacaggaattgatgagt
tcactggttaacctgctgtcaacttttgtggcacgctacccctcagcactcttggcccgc
taccttaatagtgacatcgcgatattactgccccacaaaaccctgaaagatgccgatgtg
atggccgcacagttggtgaatgcggtgagaaccttaccggagcctcatattattgatcgc
gaatcactgttgcatattggcatcgtggcttaccggagtggtgagtcagtcgaacaaatt
atggacaatgccgggcaggcgaccaaaagtgcggcgctgtatggtggcaacggttggtat
gtgttcgacactcaggtaccggagcgcggacgtggcagtgttaaatggcgtacattactg
gaacagactctggcgagcggaggcccaaggctttatcaaaaacccgttattactgttgat
ggcaaaataagccatcgtgaaataattagccgcatatatgatggtgagcaggagctactg
gcggccgagtttatgcccttggtacaattgctcggattgggtgaacgttatgatcggcaa
aagattgataagataattcctttattatctttatggccggatgaaacgctggcattttct
atcagcgttgattcattattacatcgtcctttccagcgctggttgcgtgacacgctatta
cagtgcaaaaaatctgaccgaatgcgaattatctttgaacttgcagaggcagatgtgtgt
caacatatcgaagaaatccgccaaatggtccgtttattgcgtggcgtaggctgcaaagtg
atggcatcacaggctggattgacggttgtcagcacctcatatattaagtctttgcaggtt
gaaatgataaagcttcatcccggtgtggtaagaagcattaattttcgctatgaaaaccag
ttatttgtagaaagtctgaccggtgcctgtgcagggacgcagacgaaagtttttgcggca
gaagtgcgtacccgtgaagaatggcaaacgctgcaagagaaaggcgtttacggcggacag
ggcaatttctttgctccaccgaccccattaaactccggaaagaaaaaatattcgtaa
DBGET
integrated database retrieval system
