Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4505
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Entry
YPC_4505 CDS
T01874
Symbol
hmsP
Name
(GenBank) diguanylate phosphodiesterase
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
YPC_4505 (hmsP)
Enzymes [BR:
yph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
YPC_4505 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
AtTam38
Motif
Other DBs
NCBI-ProteinID:
ADW00896
LinkDB
All DBs
Position
complement(4383608..4385623)
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AA seq
671 aa
AA seq
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MRVRRSLTIKQMAAVAVVALVTICIFIILQLFHFVQQRKDDYANQLESIAYSVRQPLSEA
ILSVDIPQAKKILNSLLPIGILSRAEVILPNQIQVLHANFPTERPIPHWAKRVFSLPVQI
TVPLYALERVPANPQPLAHLVLRADSFRMYQFILSALSAMLSTYLLLALVLSVSIAWCIN
RLIIHPLRAMAKELEDIGDHGVLHHQLTLPAHHQDDELGVLVRNYNRNQQLLADAYADMG
RISHRFPVTELPNRSLFISLLEKEIASSTRTDHFHLLVIGIETLQEVSGAMSEAQHQQLL
LTIVQRIEQCIDDSDLLAQLSKTEFAVLARGTRRSFPAMQLARRIMSQVTQPLFFDEITL
RPSASIGITRYQAQQDTAESMMRNASTAMMAAHHEGRNQIMVFEPHLIEKTHKRLTQEND
LLQAIENHDFTLFLQPQWDMKRQQVIGAEALLRWCQPDGSYVLPSGFVHFAEEEGMMVPL
GNWVLEEACRILADWKARGVSLPLSVNISGLQVQNKQFLPHLKTLISHYHIDPQQLLLEI
TETAQIQDLDEALRLLRELQGLGLLIALDDFGIGYSSLRYLNHLKSLPIHMIKLDKSFVK
NLPEDDAIARIISCVSDVLKVRVMAEGVETEEQRQWLLEHGIQCGQGFLFSPPLPRAEFE
AQYFSSAHHVS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtaaggcgctcattaacgattaaacaaatggcagcggtggcagtagttgcactg
gtgactatctgtatttttatcatccttcagttgttccactttgtgcaacagcgtaaagat
gattatgccaaccagttggaaagtattgcttattcggttcgccaacccctatctgaggcc
atactcagcgttgatattccacaagctaaaaaaatcctcaacagcctattacctattggt
attcttagccgtgctgaagtgatattaccgaaccaaatacaggtattgcacgcaaacttt
ccaacagagcggcccattccacactgggccaagcgggttttctccttgcccgtacagata
accgtgcctttatatgcgttggaacgggtacccgcaaaccctcagcccttagcgcattta
gtcctgcgtgctgactctttccgtatgtatcaatttattctcagcgctctgtcagccatg
ctctcaacatatttgttactggcattggtgttatcggtatctatcgcttggtgtattaat
cgcctgattattcacccgctgcgggcaatggccaaagagctggaggatattggtgaccac
ggggtgctgcatcatcaactgacgctaccggcgcatcatcaggatgatgaactgggtgtg
ttggtgcgtaattacaaccgcaatcagcaactgttagcggatgcctatgctgatatgggc
cgcattagtcaccgtttcccggtgactgaattgcccaatcggtcattatttatcagcctg
ctggagaaagaaattgcctccagtacgcgtacagatcactttcatctgttggtgattggt
attgaaaccctgcaagaggtttctggcgccatgagtgaagcccagcaccaacagttattg
ttgacgatagtacagcggatcgagcagtgcattgatgacagcgacctgttagcgcaactg
agtaaaactgaatttgccgtgttagccagaggtacccgccgctcattcccagccatgcaa
ttggctcggcggattatgtcgcaagtgacccaaccgctgtttttcgacgagataacattg
cgccccagtgccagtattggtatcacccgctatcaggctcaacaggacactgccgaatcc
atgatgcgcaatgccagtacagcaatgatggcggctcatcatgaggggcgtaatcagata
atggtatttgagcctcatttgattgaaaaaacgcacaagcggctgacgcaggaaaatgac
ctcttacaggcgattgaaaaccacgatttcacgttattcttacaacctcaatgggatatg
aagcgccagcaggttatcggtgcggaggcgctactgcgttggtgccaaccagatggcagc
tacgttttaccgtcaggctttgttcacttcgccgaagaggaggggatgatggtgccactg
gggaactgggtgctagaagaagcctgccgtattctggctgattggaaagcacgcggtgtt
agcctgccgttatcggtgaatatatcgggcttacaggtacaaaataaacagttcttgccg
catttgaaaacgctcattagccactatcatattgatccacaacaattgttactggaaatt
accgaaactgcccagattcaggatctcgatgaagcattgaggctactgcgtgagttacag
gggctggggttattgatcgcgttagatgattttggtattggctactcaagcttacggtat
cttaaccacctgaaaagcttgcctatccatatgattaagttggataagagctttgtgaaa
aatttgccagaggatgacgcgatagcgcgcattattagctgtgtttctgatgtactaaag
gtacgtgtgatggccgaaggggtcgaaacagaagagcagcgccaatggttgctagagcat
ggcattcaatgcggccaaggcttccttttctctccgccactgccacgtgcagaatttgaa
gcccagtatttcagcagcgctcaccacgtaagttaa
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