Yoonia phaeophyticola: AABB29_05210
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Entry
AABB29_05210 CDS
T10493
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
yphy Yoonia phaeophyticola
Pathway
yphy00300
Lysine biosynthesis
yphy00470
D-Amino acid metabolism
yphy01100
Metabolic pathways
yphy01110
Biosynthesis of secondary metabolites
yphy01120
Microbial metabolism in diverse environments
yphy01230
Biosynthesis of amino acids
Module
yphy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yphy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AABB29_05210 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AABB29_05210 (lysA)
Enzymes [BR:
yphy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AABB29_05210 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WZC50045
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All DBs
Position
794052..795320
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AA seq
422 aa
AA seq
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MDHFLYRNGVLHAEDVPIADIAATVGTPFYVYSTATLTRHFTLFDEALNFADHLVCFAMK
SASNQAILKVLANAGAGMDVVSGGEYLRAKAAGVRGDKIVFSGVGKTADEMRLALEGGIR
QFNVESEPEMIVLDQVAQSLGVIAPITVRVNPDVDAKTHAKIATGKSENKFGIPISRARE
VYAMAASLPGLKVIGIDVHIGSQLTDLAPFEAAYRKVAELTEQLRADGHEIKRLDLGGGL
GIPYARSNEAPPLPTDYGALIERTVGHLGCEIEIEPGRLISGNAGLMVSKVIYVKSGEDR
DFLILDGAMNDLIRPAMYEAWHDIVPVVEPAPGAEPAKYDIVGPICESGDTFAKGREMPA
VGPDDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVDGDQFAVIRPRPTYEEMIARDTVPKW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
ttggatcattttctttatcgtaacggtgttttgcatgctgaggatgttcccattgcagat
attgcagcgacggtggggacgccgttttatgtctattccacggccacactgacccgtcat
ttcacgctgtttgatgaggcattgaattttgccgatcatctggtgtgttttgccatgaaa
tccgcatcaaatcaggccatcctaaaggtacttgcgaatgcgggcgccggtatggatgtc
gtatcgggtggagaatatttgcgcgcgaaggccgctggcgtgcggggcgacaaaatcgtt
ttctcgggcgttggcaaaaccgctgatgaaatgcgtctggcccttgaaggtgggattcgg
caattcaatgtcgaaagcgagcctgagatgatcgtgcttgatcaggtggcccaatcattg
ggtgtcatcgccccgatcacggtgcgcgtgaaccccgatgtggatgcaaaaacccatgcc
aagatcgcgaccggcaaatctgaaaacaaatttggcattccgatcagccgcgcgcgcgaa
gtatatgccatggcagccagcttacccgggctgaaggtcatcggcattgatgtccatatt
ggatcgcaattgaccgatcttgccccgtttgaggcagcctatcgcaaagttgctgaactg
accgagcagctgcgcgcagatggccacgagatcaaacgcctagatctggggggcggtctc
ggcattccttatgctcgctcgaacgaagcaccgccgctgccgaccgattatggcgcattg
attgagcgaaccgtcggccatttgggctgcgagatcgaaattgaacctggccgcttgatt
tccggcaatgccgggttgatggtatccaaggtgatctatgtcaaatccggcgaagatcgc
gattttctgattctcgatggcgctatgaacgacctgatcagaccagcaatgtacgaagct
tggcacgacatcgtgccagtggttgagcccgcgcccggcgcagagcccgcaaaatatgac
attgttggccctatttgtgagagcggtgatacatttgctaagggtcgcgaaatgcctgcg
gttggcccggatgatctggtcgcattccgctctgccggggcttatggtgcggtgatgtca
tcggaatataactcgcgcccacttatccccgaggtgcttgtggatggtgatcaatttgca
gttatccgcccacgccctacctatgaagaaatgattgcgcgcgatacggtgccaaagtgg
ttagactaa
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