Yoonia phaeophyticola: AABB29_05615
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Entry
AABB29_05615 CDS
T10493
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
yphy Yoonia phaeophyticola
Pathway
yphy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AABB29_05615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yphy03400
]
AABB29_05615
Enzymes [BR:
yphy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AABB29_05615
DNA repair and recombination proteins [BR:
yphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AABB29_05615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WZC50122
UniProt:
A0ABZ2V7B2
LinkDB
All DBs
Position
complement(711929..712717)
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AA seq
262 aa
AA seq
DB search
MPFTLATWNINSVRLREDIVARLMREEAPDVLCLQECKSPVDKIPREQFTALGYTHMVAR
GQKGYNGVAIFSKIPMVEVGAEDFADLGHARHVAARLENGVTIHNHYVPAGGDVPDRDVN
EKFGQKLDYLTDMRDAFNAAKPEKAILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVEHF
NAVMDAGDWSDVTRNDIPEGQLYSWWSYRARDWDAADKGRRLDHIWATPDIKNAAHGSRV
MRAARGWEKPSDHAPVFASFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcactcttgccacctggaatatcaattcggtccgtctgcgcgaggatatcgtc
gcgcggttgatgcgcgaagaggcacccgatgtcctttgcttgcaggaatgcaaaagtccg
gtcgacaaaatcccgcgcgaacaattcacggcgctgggttacacacatatggttgcgcgc
gggcaaaaaggatacaatggagtagcgattttctcaaaaatcccaatggttgaggttggg
gcagaagactttgctgatctcggccatgcgcggcatgttgcggcgcggctcgaaaacggg
gtgaccatccacaaccattatgtgcctgcaggtggcgatgtgccagatcgcgatgtgaat
gaaaaattcggccaaaagctcgattatctgactgatatgcgcgatgcgttcaatgccgca
aagccagagaaagcgattcttgttggtgatctgaatatcgcaccgcgtgaagacgatgtg
tggagccataaacagcttttgaaagtggtcagtcatacgccaattgaagtggagcatttc
aatgcagtaatggacgctggtgattggtccgacgtgacccggaatgacatccccgagggg
cagctttacagctggtggtcctaccgggcgcgggattgggacgcggcggataaaggacgt
agacttgaccatatttgggccacgccggacatcaaaaatgcagcacatggatcacgggtc
atgcgggcggcacggggctgggagaaaccaagcgaccacgcccccgtctttgcgagcttt
gatctgtga
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