Yoonia phaeophyticola: AABB29_10380
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Entry
AABB29_10380 CDS
T10493
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
yphy Yoonia phaeophyticola
Brite
KEGG Orthology (KO) [BR:
yphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yphy03009
]
AABB29_10380 (rimO)
Enzymes [BR:
yphy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AABB29_10380 (rimO)
Ribosome biogenesis [BR:
yphy03009
]
Prokaryotic type
ribosomal protein modification factors
AABB29_10380 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Thioredoxin_6
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WZC47348
LinkDB
All DBs
Position
3712385..3713782
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AA seq
465 aa
AA seq
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MTQNPPNLRPDLAPAAKITEASRPGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPD
YSGAEAVIVNTCGFLDSAKAESLDAIGEALQENGKVIVTGCLGAEPDYIREHHPQILAVT
GPHQYEQVLDAVHSTVPPSPDPFIDLLPGTGVSLTPRHYSYLKISEGCNHKCKFCIIPDM
RGKLASRPAHAVLREAEKLVDAGVKELLVISQDTSAYGLDRKYDVNPWKDGEVRSHILDL
TRELGTLGAWVRLHYVYPYPHVRDLIPVMADPANGVLPYLDIPFQHGHPDVLRRMARPAA
GAKTLDEIAAWRATCPDITLRSTFIVGYPGETEAEFQHLLDWLDEAQLDRVGCFQYENVD
GARSNALPDHVAAEVKQDRWDRFMAKAQAISEAKLEAKVGKTLEVIVDDIDEDGIATCRT
WADAPEIDGNLFIDEGAEGLAVGDTLHVEVEEAGEYDLWGRKNSI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaacccgcccaatctccgccccgacctggcccctgcggccaagatcaccgaa
gccagccgccccggccagcccaccatcggcatggtcagcttggggtgccccaaagccttg
gtagacagcgagcggatcctgacgcggctgcgggccgaaggctacgcaatctcgcccgac
tacagcggggctgaggcggtgatcgtgaacacctgcgggttcctcgatagcgccaaagcg
gaaagtctcgacgctattggcgaagcgctgcaggaaaatggcaaggtcatcgtcacggga
tgtctgggggccgaacccgactacatccgcgaacatcacccgcaaatcctggccgtcacc
gggccacaccaatacgaacaggtgctggacgccgtgcacagcaccgtgccgcccagcccc
gatccgttcatcgacctgctgcccggcaccggggtctcgctgacaccgcgccactacagc
tatctgaaaatctcggaaggctgtaaccacaaatgcaagttctgcatcatccccgacatg
cgcgggaaactggcgtcacggcccgcccacgccgtgctgcgcgaggcggaaaagctggtg
gatgccggggtcaaagaactcctcgtgatttcccaagatacctcagcctatgggctggac
cgtaaatatgacgtaaacccctggaaagacggcgaggtgcgcagccatatcctcgacctc
acccgcgagctgggcactttgggcgcctgggtccggctgcactacgtctacccctacccc
catgtacgcgacctgatcccggtgatggccgacccggcaaacggagtcctcccctacctc
gacatccccttccaacacggccaccccgacgtgctgcggcggatggcgcggccagctgcg
ggggccaaaacgctggatgagatcgcagcctggcgggccacctgccccgacatcacccta
cggtcgaccttcatcgtcggctacccgggggaaaccgaggccgaattccaacacctgctc
gactggctggacgaggcgcaattggatcgggtcggctgcttccaatacgaaaacgtggac
ggggcacgcagcaacgccctgcccgaccatgtggcagcggaggtgaagcaagaccggtgg
gaccgtttcatggccaaagcgcaagccatctccgaggcgaagctggaagcgaaagtcggc
aagacgctagaggtcatcgtggacgacatcgacgaagacgggattgcgacctgccgaacc
tgggcggatgcgcccgagatcgatgggaacttgtttatcgatgaaggggctgaggggttg
gctgtcggggatactttacacgttgaagttgaggaagcgggcgagtatgatttgtggggg
cgaaaaaatagtatttaa
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