Yoonia phaeophyticola: AABB29_12685
Help
Entry
AABB29_12685 CDS
T10493
Name
(GenBank) extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
yphy Yoonia phaeophyticola
Pathway
yphy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yphy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AABB29_12685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yphy02000
]
AABB29_12685
Transporters [BR:
yphy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AABB29_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XFO62967
LinkDB
All DBs
Position
3249910..3251724
Genome browser
AA seq
604 aa
AA seq
DB search
MTISFHKIARPMALAFAINGIGAALFAEPQHGIAMYGDPALPPDFVSLPYANPDAPKGGR
VVTAEVGSYDSLNPYITKGRVPWQLRFLIGESLMGRSLDEPFSLYGVLAESVETGPNREW
VEFTINPAAKFSDGSPVTTEDVIWSFEILGTEGHGRYRGFWEKVESLEEVRPGTVRFTFN
VEDQELALLAGLRPILQKAQWENLDFTESGTDVVPITSGPMVISDFEPGRYISLTRNPDY
WGADVPFRRGTYNFDEIRLEFFGDETPAFEAFTAGEVNFTREFNIARWETRYEFPAVQSG
DVVKSVLPHGRPTGMTGFVMNTRDPLFADWRVRDAMLHAFNFQVINETVTGRAQPRIASY
WGNSPLGMQEGTATGKVAEILAPFEDELLPGTLEGYALPAGDESQRNRADMRVAIDQMEA
AGWTIEDGVMQNAEGTPFAFELLLEQGSSENLAMADIFAETLESMGIAMEIGVADAAQYK
ERTDAYNFDMTYYRRGVSLSPGNELYFYYGMENADTPGGRNLMGIKSPAADAMIDRMLTS
PSQDDFVAAVQGLDRILTAGRYVIPFYQWNVSRIAHAKELHHPEYIPVWGDWPGWQPDVW
WYEE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaccatctcttttcacaagatcgcgaggccgatggcactggcgtttgccataaacggg
atcggggcggccttatttgccgagccgcagcatggcatagctatgtatggggaccctgcc
ctgccaccggattttgtgtccctcccctatgctaatcccgatgcgcccaagggcggacgg
gtcgtcacggccgaggtcggcagctatgacagcctgaacccatatatcaccaaaggccgg
gtgccgtggcagcttcgctttttgattggcgagagcctgatgggccgctcgttggacgaa
cccttctcactttacggcgttttagccgaatcggttgaaacggggccgaaccgcgaatgg
gtcgaattcacgatcaaccctgctgcaaaattcagtgacggtagcccggtaaccaccgaa
gatgtgatctggtcgtttgagattttgggcaccgagggccatggccgctatcgcggtttt
tgggaaaaggtcgaaagcctggaagaagtgcgacccggcactgtacgcttcaccttcaat
gtagaagatcaagaactggcgcttctggccggtttgcgcccgatcttgcaaaaggcacaa
tgggagaacctggatttcaccgaaagtggaaccgacgtggtccctattacatcggggcca
atggtcatctcggatttcgaacccggccgctatatctcgctgacgcgcaatcctgattat
tggggtgctgacgtgccgttccgccgcggcacatataattttgatgagatccggcttgag
tttttcggcgatgaaaccccagcttttgaggcatttacggcaggcgaagtgaatttcacc
cgtgaattcaacattgcccgctgggaaacgcgctatgaatttccggctgtccagtccggc
gacgtggtcaaatccgtgcttcctcatggacgcccgaccggaatgacaggctttgtgatg
aacactcgcgatccgctttttgcggattggcgggtccgcgatgcgatgctgcatgcattt
aacttccaagtcatcaacgaaaccgtcacaggccgcgcgcagccgcgtatcgcatcttat
tggggtaattccccacttggaatgcaagaaggcacagcaaccggtaaggtggctgaaatc
cttgcgccatttgaggatgaactactgcccggaaccttggaaggttacgcgctacctgct
ggtgatgaaagccagcgcaatcgggccgatatgcgcgttgctatcgaccagatggaagcc
gcaggttggacgatcgaagatggtgttatgcaaaatgccgaaggcaccccctttgccttt
gagctgctgctggaacaaggcagctctgaaaaccttgcaatggccgatatctttgccgaa
acgctggaaagcatggggatcgcgatggaaatcggtgtcgccgatgctgctcagtacaaa
gagcggaccgatgcttataattttgacatgacctattatcggcgcggtgtgtcactttcg
ccaggtaatgagctttacttctactatggcatggaaaacgcagacacgccgggcgggcgg
aatctgatgggcatcaaatcacccgcagcggacgcaatgatcgaccgaatgctcacttcg
cccagtcaggatgactttgtcgcagccgttcaggggcttgatcggattctgactgcggga
cgttacgtgatcccgttctatcaatggaacgtcagccggatcgcccatgccaaggaactt
caccaccccgaatacatcccggtttggggtgactggcccggttggcagcccgatgtctgg
tggtacgaagaataa
DBGET
integrated database retrieval system
