Yoonia phaeophyticola: AABB29_16375
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Entry
AABB29_16375 CDS
T10493
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
yphy Yoonia phaeophyticola
Brite
KEGG Orthology (KO) [BR:
yphy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yphy03021
]
AABB29_16375 (rpoH)
Transcription machinery [BR:
yphy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AABB29_16375 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_19
Sigma70_r3
HTH_11
UCR_14kD
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
WZC48419
LinkDB
All DBs
Position
2544598..2545494
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AA seq
298 aa
AA seq
DB search
MSNYKNLPAPTPEGGLNRYMQEIRKFPMLEPEEEYMLAKRWVDHEDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKNRIGALEDGDLRPENVKQIANDLGVTEDEVISMNRRL
SGGDASLNAQVGSDGDGAMQWQDWLEDESANTAADYEASDELDARRAMLAEAMGVLNDRE
KDILMQRRLSEETVTLEELSGQYDVSRERIRQIEVRAFEKLQKKMQEMARDKGMLTPA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaattacaagaatcttccggcaccaaccccagagggtgggctgaaccgttacatg
caggaaatccgcaaattccccatgctggagcctgaagaagaatatatgctggccaaacgc
tgggtggatcatgaagacaccgaagcggcgcataaaatggtgacgtcacacctgcgcctg
gcggccaaaatcgctatgggttaccgcggctatggactgccccaggccgaggtgatttct
gaggccaatgttggcttgatgcaggccgtcaaacgatttgacccggaaaagggtttccgt
ctggcgacctatgccatgtggtggatccgtgcctcgatccaggaatatatcctgcggtcc
tggtccttggtgaaactgggcacgacatcagcacagaaaaagctgttctttaacctgcgc
aaagccaagaaccggattggcgcgcttgaagatggcgatctgcgccctgagaacgtcaaa
cagatcgcaaatgatctgggtgtgaccgaggatgaagtgatctcaatgaaccgccgtttg
tctggtggtgatgcgtcgcttaatgcgcaggtcggttctgatggcgatggcgcgatgcaa
tggcaggactggcttgaggatgaaagcgcgaacacggccgccgattatgaggccagtgat
gagcttgacgcccgccgtgcgatgctggccgaagccatgggcgttttgaatgatcgcgag
aaggatattctgatgcagcgccgcttgtcagaagaaaccgtcacgctggaagagttgagc
ggccaatacgatgtcagccgcgaacgtatccgccagattgaggtccgcgccttcgaaaaa
ctgcagaagaaaatgcaggaaatggcccgtgacaaggggatgcttacccccgcgtaa
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