Yoonia phaeophyticola: AABB29_19850
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Entry
AABB29_19850 CDS
T10493
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
yphy Yoonia phaeophyticola
Pathway
yphy00300
Lysine biosynthesis
yphy00470
D-Amino acid metabolism
yphy01100
Metabolic pathways
yphy01110
Biosynthesis of secondary metabolites
yphy01120
Microbial metabolism in diverse environments
yphy01230
Biosynthesis of amino acids
Module
yphy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yphy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AABB29_19850 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AABB29_19850 (dapF)
Enzymes [BR:
yphy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AABB29_19850 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WZC51014
UniProt:
A0ABZ2V8U5
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All DBs
Position
1871913..1872740
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AA seq
275 aa
AA seq
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MPAMALNDETYLPFMKMHGLGNDFVVVDERESPPRVDSALAIAIADRHRGVGFDQLAVLS
PTDQADVRLTFWNSDGSQAAACGNATRCIARYLMQESGSVSLRIQTERGLLHAVDAGGGL
TSVNMGRPMIDWQDVPLAHDMDTLTLPIEGAPTATGMGNPHCTFFVADAEAVDLEARGAE
IEHHPLFPERTNVQFASQIGPDHLRMRVWERGVGVTLASGSSSCATAVAAVRRGLAGRDV
KIDLDGGQIAISWRDDGVWMTGPTAHVFDGKWRLS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctatggctttgaacgatgagacatatctgcccttcatgaagatgcatgggctg
ggcaatgactttgttgtcgtggacgagagggaatcgccccctcgcgttgattctgccttg
gccattgctatcgccgaccgtcatcgcggggttggttttgatcagcttgcggtcctgtcg
ccgaccgatcaggctgatgtgcgtcttaccttttggaatagtgatggatcgcaagctgcc
gcatgtggcaacgccacccgctgtatcgcgcggtatctgatgcaagaaagcggtagcgtt
tccttgcggatacagaccgaacgcggtctgctgcatgcggtagatgccggtggtggctta
acttcggtcaatatgggccggcccatgatcgattggcaggacgttccattggcgcatgac
atggataccctgacgctgcctattgagggcgcgcccacggccaccggtatgggcaatccg
cattgcacgttctttgtggcggatgctgaggcggtcgaccttgaggcgcggggggcggag
atagagcatcaccccttgttccccgaacgtaccaacgtgcaattcgccagtcagatcggt
ccagatcatctccgcatgcgcgtttgggagcgcggggtgggtgttacgcttgcctctggc
tcatcatcttgtgcgacggcggtggcggcggttcggcgtggtttggcggggcgtgatgtc
aagattgatctcgatggcggacaaatcgcgatttcctggcgcgatgatggggtttggatg
actggccccacagcgcatgtctttgatggcaaatggcggctgtcatga
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