Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_0040
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Entry
YpsIP31758_0040 CDS
T00570
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YpsIP31758_0040 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ypi03021
]
YpsIP31758_0040 (rpoZ)
03400 DNA repair and recombination proteins [BR:
ypi03400
]
YpsIP31758_0040 (rpoZ)
Enzymes [BR:
ypi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YpsIP31758_0040 (rpoZ)
Transcription machinery [BR:
ypi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
YpsIP31758_0040 (rpoZ)
DNA repair and recombination proteins [BR:
ypi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
YpsIP31758_0040 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
DUF1599
Motif
Other DBs
NCBI-ProteinID:
ABS47869
UniProt:
A7FCR3
LinkDB
All DBs
Position
complement(49507..49782)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQSGGKDALVPEENDKVTVIALREIEEGLIT
NQILDVRERQEQQEQEAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgctcgtcgggcacgtcaaatccagtccggcggtaaagacgcactggttcca
gaagagaacgataaagttactgtaatcgcgttacgtgagatcgaagaaggcctgatcacc
aatcagattctcgatgttcgtgagcgccaagagcagcaagagcaggaagccgcagagatc
caagcggttaccgccattgctgaaggtcgtcgttaa
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