Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_0280
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Entry
YpsIP31758_0280 CDS
T00570
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi00130
Ubiquinone and other terpenoid-quinone biosynthesis
ypi01100
Metabolic pathways
ypi01110
Biosynthesis of secondary metabolites
ypi01240
Biosynthesis of cofactors
Module
ypi_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
ypi_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
YpsIP31758_0280 (ubiD)
Enzymes [BR:
ypi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
YpsIP31758_0280 (ubiD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ABS47567
UniProt:
A7FDE9
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All DBs
Position
312243..313739
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AA seq
498 aa
AA seq
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MISMKYRDLRDFLSLLEQRGELKRISQPIDPYLEMTEIADRTLRAGGPALLFENPKGYSM
PVLCNLFGTAKRVAMGMGQEDVSALRDVGKLLAFLKEPDPPKGFRDLFDKLPKFKQVLNM
PTKRLNSAPCQEQVWQGEDVDLSRIPVMHCWPEDAAPLVSWGLTITRGPHKERQNLGIYR
QQVLGKNKLIMRWLSHRGGALDYQEWCEAHPGERFPVAVALGADPATILAAVTPVPDTLS
EYAFAGLLRGHKTEVVKCLSNDLEVPASAEIVLEGYIEQGDMAPEGPYGDHTGYYNEIDN
FPVFTVTHITQRQDAIYHSTYTGRPPDEPAVMGVALNEVFVPILQKQFPEIVDFYLPPEG
CSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDINARDWNDVIWAITTR
MDPSRDTVLIENTPIDYLDFASPVSGLGSKMGLDATNKWPAETPREWGRPIKMDEDVRAR
IDALWDELAIFSDKDAKR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcatgaaataccgtgacttacgtgacttcctctcattactggaacagaggggg
gaacttaaacgcattagccagcccattgatccttatttggaaatgacagaaattgccgat
cgcacgttacgtgctggtgggcctgcgttactttttgagaaccctaaaggttacagcatg
cccgtgttgtgtaatctgtttggcaccgctaagcgagtcgccatggggatggggcaagaa
gatgtcagcgccctgcgagatgttggtaaattattggccttcctgaaagaacccgatccc
ccaaaaggtttccgtgacttatttgataagctgccaaaatttaagcaggtattgaatatg
ccaacgaaacgcttgaactcggccccgtgtcaggagcaagtttggcaaggtgaggatgtt
gatttaagtcgcatccctgtgatgcactgctggccagaagatgccgcaccactagtctct
tgggggttgactattacacgtggtccccacaaagaacggcagaatctaggcatctatcgc
cagcaggtattgggtaaaaacaaattaattatgcgttggctatcgcatcgtggtggtgcg
ctggattatcaggagtggtgtgaggcacaccctggtgaacgttttccggtcgctgtcgcc
ttgggagcagaccctgctacgatcttagccgcagtgaccccggtaccagacacgctgtct
gaatatgcctttgccggcttgttacgcggccataaaacggaagtggtgaagtgtctttcc
aatgaccttgaagttcctgcaagtgcagaaattgtattggaaggatatatcgaacaaggt
gatatggctccggaaggtccttatggtgatcatacgggctattacaatgaaatagataat
ttccccgtgtttaccgtcacgcatattacacagcgccaagacgcaatttatcattcaacc
tatacgggccgaccaccggatgaacctgcggtaatgggggtggcactgaacgaagtcttt
gtacctattttgcaaaagcaattcccggaaattgttgatttctacttgccaccagaaggg
tgctcataccggttggcggtggtaaccatcaagaaacaatatgcaggccatgccaaacgc
gtgatgatgggagtatggtcgtttttacgccagtttatgtataccaagtttgttattgtt
tgtgatgacgatattaatgctcgtgattggaatgatgtaatttgggcgatcaccacccgg
atggacccatcccgcgatacggtgttaattgaaaatacaccgatagattatttggatttc
gcctcaccggtttccggtttgggatcgaaaatggggctggatgccaccaacaaatggcca
gcagagactccgcgtgaatgggggcgtccaattaagatggacgaagacgtccgtgcccgt
attgatgctctgtgggatgagctggccattttcagtgacaaagacgcgaaacgctaa
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