Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_0402
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Entry
YpsIP31758_0402 CDS
T00570
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypi03019
]
YpsIP31758_0402 (cafA)
03009 Ribosome biogenesis [BR:
ypi03009
]
YpsIP31758_0402 (cafA)
Messenger RNA biogenesis [BR:
ypi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YpsIP31758_0402 (cafA)
Ribosome biogenesis [BR:
ypi03009
]
Prokaryotic type
rRNA processing factors
YpsIP31758_0402 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABS48517
UniProt:
A0A0U1R093
LinkDB
All DBs
Position
462178..463647
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AA seq
489 aa
AA seq
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MTAELLVNITPSETRVAYIDGGILQEIHIEREAKRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKNFNVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVLMPGAAHVGVSQRIESEAERERLKKTVAAYCDEQGGFIIRTAAEGIGEE
ELSADAAFLKRLWTKVQERKKRNITKYKLYGEMALAQRVLRDFAGAALDKIRVDSKLTYD
LLVEFTREYIPEMTDKLELYTGKQPIFDLYDVENEIQRSLERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRMRNLGGIIIIDFIDMSNEDHRRRV
LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESIEHVLCHECPTCRGRGTVKSVETV
CYEILREIVRVHHAYDSDRFLVYASPAVGEALKGEESHALAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaattactggtcaatattacaccgtctgaaacgcgtgttgcttatattgat
ggcggcatcctgcaagaaatacatatcgagcgtgaagccaaaagagggatcgttggcaat
atttataaagggcgagtcagccgggttttaccgggtatgcaagctgcttttgttgacata
ggtctggataaagccgctttcctccatgcttccgatatcatgccccacaccgaatgcgtg
gccggggatgaacagaaaaacttcaatgtgcgcgatatcgccgaactggtccgtcagggg
caggatttaatggtacaagtggtgaaagatcccttgggtaccaaaggcgcacgtttgacg
accgatattactcttccttctcgctatctggtgttaatgcccggagctgcccatgttggg
gtttcccagcggattgaaagtgaagcagagcgcgaacgcctaaaaaagacggttgcggct
tactgtgatgagcagggcggttttattattcgtactgccgctgaagggattggcgaagaa
gagctatccgctgatgccgcgttccttaaacgtttgtggaccaaagttcaggagcgtaag
aagcgtaatatcaccaaatataagctgtatggtgaaatggcgctggcgcaacgcgtattg
cgtgattttgctggtgcggcgctggataaaatccgcgttgactcaaaattgacttacgat
ttgctggtggagttcacccgcgaatatattccagaaatgacggacaagctggagctgtat
actgggaagcaacctattttcgatctctatgatgtcgagaatgaaattcagcgctctctg
gagcgtaaagttgaattaaaatcaggtggttatctgattatcgatcagacagaagcgatg
actaccgtggatattaacactggggcatttgtcgggcatcggaatcttgaggaaaccatt
ttcaataccaatattgaggcgacgcaggccattgcccgccaattgcggatgcgtaatctg
ggcgggattatcattattgatttcattgatatgagtaatgaagatcatcgccggcgggta
ttgcattcattggaacaagcactgagtaaagatcgcgtaaaaaccagtattaacggcttc
tcccagctaggcttagtcgaaatgacgcgtaagcgtacgcgtgaaagtattgagcatgtt
ttatgccatgaatgcccaacctgccgtggccgtggcacggtaaaatccgtagagaccgtg
tgctacgaaatcttgcgtgaaattgtccgtgttcatcatgcttatgattctgaccgtttc
ttggtctatgcttctccggctgtaggtgaggcgctgaaaggcgaagagtctcatgcactg
gccgaggtggaaatcttcgtcggtaagcaggtaaaagttcagatagagccactgtataac
caagaacagtttgacgtggtgatgatgtaa
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