Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_0881
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Entry
YpsIP31758_0881 CDS
T00570
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi03410
Base excision repair
ypi03430
Mismatch repair
ypi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YpsIP31758_0881 (recJ)
03430 Mismatch repair
YpsIP31758_0881 (recJ)
03440 Homologous recombination
YpsIP31758_0881 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypi03400
]
YpsIP31758_0881 (recJ)
DNA repair and recombination proteins [BR:
ypi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
YpsIP31758_0881 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YpsIP31758_0881 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
YpsIP31758_0881 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABS46668
UniProt:
A0A0U1QVW6
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All DBs
Position
1063295..1065028
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AA seq
577 aa
AA seq
DB search
MTLKTQLRRREAADDSHLPAQLPPLLRRLYASRGVKDAQELERGVKGLLAWQKLDGIDAG
VTLLQQALADRRRIVIVGDFDADGATSTALAVLALRSMGGSNLDYLVPNRFEDGYGLSPE
VVEQVAARGAELIVTVDNGISSHAGVDLAHAKGIQVLVTDHHLPGETLPAADAIINPNLA
GCDFLSKSLAGVGVTFYLMLALRARLRECGWFEQRTLAVPNLAELLDLVALGTVADVVPL
DANNRILVHQGLSRIRAGKCRPGIRALLEVANRDARQLVANDLGFSLGPRLNAAGRLDDM
SIGVALLLSDDIAQARALAIDLDTLNQTRREIEQGMQVEALQLCDQLERTSSELPYGIAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGLLKGSGRSVAGLHMRDALERLDTLNP
GLILKFGGHAMAAGLSLEEGKFDEFRQRFADLVGEWMDASQLEGVIWSDGELNGAELSLE
TAELLRDGGPWGQSFPEPTFDGKFRILQQRLVGERHLKLMVEPLNGGPLLDGIAFNVDTT
LWPDSSVREVKLAYKLDINEYRGNRSVQLLVQHLWPY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttgaaaacccaacttcgccgccgtgaggcggcagatgacagccatttacctgcg
caattgcccccgttactgcgtcgtctctatgctagccgtggcgtaaaggatgcgcaggag
ttggagaggggcgtgaaaggcctactggcatggcaaaaactggatggtattgacgctggc
gtcaccttattacaacaagccctggctgatcggcggcgtattgtcattgtcggcgatttt
gatgctgacggcgcgaccagtaccgcgttggcggtgctggctttgcgcagtatgggcggc
agtaacctggattatctggtacctaaccgatttgaagatggttatgggcttagccccgaa
gtggttgaacaagttgcggccagaggggcagagctgattgttactgtggataacggtatt
tcctctcatgccggggtcgatctggctcatgccaaaggtattcaggttctggtgacggac
caccatttgccgggcgaaacattacccgcggcggatgccatcattaacccaaatctggcc
ggttgcgattttttatccaagtcattggcgggggtcggtgtcactttctatttgatgctg
gcgctgcgcgcccgtctcagggaatgtggttggtttgaacaacgtaccttagcggtccct
aatctggctgaactgttggatttggtggcattgggtacggtggcagatgtggtgccgttg
gatgccaataaccgtattttggtccatcaagggttaagtcgtattcgtgcggggaagtgc
cgtccaggaattcgcgcattattggaggtcgctaaccgtgatgcgcgtcaactggttgcg
aacgatttaggcttttctcttggcccacggttgaatgcggcggggcgtttagatgatatg
tccatcggggtggcgctactgctgagtgacgatattgctcaggcgcgagcactggcaatc
gatcttgacaccttgaatcaaacccggcgcgagatagaacagggtatgcaggttgaagct
ttgcaactgtgtgaccagttggagcgcaccagcagtgaattaccttacggtatcgcgatg
taccatccagaatggcatcagggcgttgtgggtattttggcttcacgcatcaaagaacgc
tttcaccgcccggttatcgcttttgccccggcgggagaagggttattgaaagggtcgggt
cgtagcgttgcgggtttgcatatgcgtgatgcccttgagcgtctggacactctgaaccca
gggttaatactgaagtttggtgggcacgccatggcggcagggttatcgctggaggaaggt
aaattcgatgaattccgccagcgttttgcagatttagtcggtgaatggatggatgcttcg
caattggaaggcgttatttggtctgatggcgaactgaacggtgctgagttatcactggag
accgcagagctattgcgcgacggtggtccatgggggcaatctttccctgagccgaccttt
gatggcaaattccgtatcttacagcagcgcttagtgggtgagcgtcacctgaaactcatg
gtagagccgctgaatggcgggcctttgttagatggaattgcctttaatgtcgataccact
ttgtggccggatagcagcgtgcgagaagttaaattggcctataaactggatattaatgaa
tatcgtggtaatcgtagtgttcagttgctggttcaacacttgtggccttattag
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