KEGG   Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_1362
Entry
YpsIP31758_1362   CDS       T00570                                 
Name
(GenBank) Clp protease-associated protein ClpB
  KO
K11907  type VI secretion system protein VasG
Organism
ypi  Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ypi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YpsIP31758_1362
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ypi02044]
    YpsIP31758_1362
Secretion system [BR:ypi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YpsIP31758_1362
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_7 AAA_22 Sigma54_activat AAA_25 AAA_14 nSTAND3 IstB_IS21 TniB Zeta_toxin Clp_N NACHT AAA_29 RuvB_N ABC_tran AAA_30
Other DBs
NCBI-ProteinID: ABS46421
UniProt: A0A0U1QVA9
LinkDB
Position
1595191..1597848
AA seq 885 aa
MAITRKHLFGKLDATLFKGIESATTICKLRGNPYVELVHWLNQLWHQEDNDLKQIIRYFA
VDVDAFERELAQALAKLPVGATSISDFSYHIELATERAWIYASLECLDTRIRSGHLLLAL
LTTMELRRAFFAIAPSMEKIPLEHLSKDLNFITQASPEANEAASDGSPLYDGALPGEASN
AIGAAKSGGTLAQYTTDLTALAREGKIDPVLGRNHEINTMVDILLRRRQNNPLLTGDAGV
GKTAIVEGLALAIAAGSMPPALSQVSLLSLDIVALSAGASMKGEFEARLKSVLDEAIAAE
KPVILFIDEVHTLIGAGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALT
RRFQVLQVDEPDENTAISMLRGLIPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKA
ISLLDTACARIAVAQHSQPIELQHLTFQSETAQTELVSLEKARHFGKAQDARTEQLKTSI
AEHGEAADKLDQRWQAERELVSAITTIRTALYDLVSQPEPDEEKRRAYQAQLVQLEAQLS
QVRTSLPLVQTEVNAEVIASIVADWTGIPVGQMLKDDIRAVMELPQRLEARVIGQPHALM
QLGENIMTARAGLSDPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNMITINMSEYQ
ESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQ
MEDGEGRFIDFKNTILLLTSNVGSELLSNLLADPDTAPDQDGILTALQPELLKVFPAAFL
GRVTVIPYLPLQQDALQHIVRLHLDRIGARLYSQHQLTLKYSDEVVDDVVSRCAVSETGA
RMLIRYIEQNITPKIGKYILGDSDVKPEQIIFVHKNENGFVIALQ
NT seq 2658 nt   +upstreamnt  +downstreamnt
gtggctattacaaggaaacatctcttcggcaagctggacgccactcttttcaaaggtatt
gaaagcgcaacaacgatttgtaaattacgcggcaatccttacgtagagttagttcactgg
ttgaatcagctttggcatcaggaagataacgaccttaagcagattattcggtattttgcg
gtggatgtggatgcctttgagcgtgagctggctcaggcacttgcgaagttacctgtcggg
gcaactagcatttcagatttttcgtatcatattgagttggccacggaacgggcttggatc
tatgccagcctggagtgtttagatacccgtatccggagtggacacctgctgcttgcgcta
ttaacaacaatggaactgcggagagctttctttgcgattgcgccaagcatggaaaaaatt
ccattagagcatttaagcaaagatttgaacttcattacgcaggcatcaccagaagcgaat
gaagcagccagtgatggcagcccgttgtacgatggagctttacctggcgaagccagtaat
gccatcggtgcggcaaaaagtggtggcacactggctcaatacaccacagacctcacggca
ttagcacgtgaaggcaagatagatccggtattgggacgtaatcacgaaatcaacacaatg
gttgatattctcttgcgccgtcggcagaacaacccattactgaccggtgacgcaggggtg
ggtaaaaccgccattgttgaagggctagcattggccattgctgcaggctcaatgccgcca
gcattaagccaggtaagcctgttgtcattagatattgtggcgctctcagcgggtgccagc
atgaaaggtgaatttgaagcgcgcctgaagagtgtcttggatgaagcgatagcggcagaa
aagcccgttattttgtttatcgatgaagttcacacacttattggcgcgggtggcaatgcc
gggaccggcgatgcggcgaacttattgaaacctgcattggcgcgtggccaattacgtacc
attggtgcgacaacgtggagcgagttcaagcgtcacattgagaaggatccggcactcacc
cgtcgtttccaagtacttcaagttgatgagcccgatgagaacacggcgatctccatgtta
cggggcctgatacctgcgctagaaaagcaccatggcgtgtggattatggacgaagcctta
caggcggcagtacggttgtctcatcgttatatccctgcgcgtcagttgccggataaagcg
ataagtctgcttgatacggcttgtgcccggatcgctgttgcacagcattcacaaccaata
gagttgcagcacttaaccttccagagtgagaccgcgcaaactgagctggtttccttagag
aaagcgcggcactttggtaaagcgcaggatgcgcgtactgagcagttgaaaacatccatt
gctgaacatggcgaggctgcagataaacttgatcagcgttggcaggcagaacgcgagttg
gtatcagcgattacgaccataagaaccgcactttatgacttggtttctcagccagagcct
gatgaggaaaaacgtcgggcttatcaagcgcaattagtccagttggaagcgcagctttct
caggttcgcacttcactgccgttagtgcagacagaagtcaacgctgaagtgatcgccagt
atcgttgcagattggaccggcatcccggttgggcaaatgctcaaagacgatattcgggcg
gtaatggagttgccacagcgccttgaagcacgtgttattggtcagccccatgcattgatg
caactgggtgagaatattatgaccgcacgcgccggtctgtcagacccaaggaaaccattg
ggggtctttatgttagtggggccttcaggtgtgggtaaaacagagacggccttagcgatt
gccgagagcatgtatggtggtgaacagaatatgatcactatcaatatgagcgaatatcag
gaatcgcataccgtttcctctttaaaaggttctccaccgggatatgttggatacggtgaa
ggcggtgtattaacggaagccgtgcgccgtaagccatatagtgttgtgttattagatgaa
atcgaaaaagcgcactctgatgtacatgaattattcttccaagtgtttgataaaggccaa
atggaagatggtgaagggcgctttatcgatttcaaaaacactattttgctgttaaccagt
aatgtgggcagcgagttactgagtaacttattagctgatccagatactgcaccggatcag
gatggaatattaactgcgttgcaacctgaattgctgaaagttttcccagcagcattttta
gggcgagtcacggttattccttatcttccgttacagcaagatgcattgcagcatattgta
cggttacatcttgaccggattggcgctcgtttatactcgcagcatcaattgacactgaaa
tacagtgatgaagtggttgacgatgttgttagtcgctgtgcggtctcagagaccggtgcg
cgtatgctgatccgttacattgaacaaaatattacgccaaaaataggtaaatatatttta
ggtgatagtgatgtgaagcctgagcaaattattttcgttcataaaaatgaaaatggattc
gtgatcgctttacaatga

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