Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_1584
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Entry
YpsIP31758_1584 CDS
T00570
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi03030
DNA replication
ypi03430
Mismatch repair
ypi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YpsIP31758_1584 (holB)
03430 Mismatch repair
YpsIP31758_1584 (holB)
03440 Homologous recombination
YpsIP31758_1584 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypi03032
]
YpsIP31758_1584 (holB)
03400 DNA repair and recombination proteins [BR:
ypi03400
]
YpsIP31758_1584 (holB)
Enzymes [BR:
ypi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YpsIP31758_1584 (holB)
DNA replication proteins [BR:
ypi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YpsIP31758_1584 (holB)
DNA repair and recombination proteins [BR:
ypi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YpsIP31758_1584 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF6587
Motif
Other DBs
NCBI-ProteinID:
ABS46212
UniProt:
A0A0U1QUS5
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All DBs
Position
1841094..1842116
Genome browser
AA seq
340 aa
AA seq
DB search
MNWYPWLNGPYRQLVGQHSTGRGHHALLLHSLPGNGEDALIYALSRWLMCQQRQGEKSCG
ECHSCRLMLAGNHPDWYVLTPEKGKSSIGVELVRQLIDKLYSHAQQGGAKVVWLPHAEVL
TDAAANALLKTLEEPPEKTYFLLDCHQPASLLATLRSRCFYWYLACPDTAICLQWLNLQW
RKRQIPVEPVAMLAALKLSEGAPLAAERLLQPERWSIRSALCSGLSEALNRSDLLSLLPQ
LNHDDAAERLQWLSSLLLDALKWQQGAGEFAVNQDQLPLVQQLAHIAATPVLLQLAKQLA
HCRHQLLSVVGVNRELLLTEQLLNWETALSTGTYSTLPSL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtatccgtggcttaacggcccttaccgacaactggttgggcagcacagtacc
gggcgcgggcaccatgcattactgctgcattcattacccggtaatggcgaagacgcatta
atttatgcgctgagtcgttggctaatgtgtcagcagcggcaaggtgagaagagttgtggt
gaatgccatagctgccgcttgatgttggcaggcaaccaccccgattggtatgtactgaca
ccggaaaaaggcaaaagcagtatcggggttgagttggttcgccaattgattgataaactg
tattcccatgctcagcaaggcggtgcaaaggtggtgtggttgccacatgccgaagtgttg
accgatgccgcggctaatgccctgctaaaaacgctggaagagcctccagagaagacctat
tttctgttggattgccaccaacccgccagcttgctggctacactgcgtagccgctgtttt
tattggtatctggcttgcccggatacggctatttgtctgcaatggctcaatctgcaatgg
cgtaagcggcagatccctgtggagcccgttgcgatgttggcggccctgaaattgagtgaa
ggcgcaccgctggcggctgagcggttgctccaaccagagcgctggagtatccgcagcgct
ttgtgtagcgggctaagcgaggcgctgaaccgctcagacttgctgtcgttgctaccacaa
cttaaccatgatgatgctgctgaacgtctgcaatggctctcttcactgctcttggatgcg
ctgaagtggcagcaaggggcaggggagtttgcggttaatcaggatcaattgccattagtg
caacagttggcacacatcgcggccacgccagtattacttcagttagctaagcaactggct
cattgccgccatcaattattatctgtggtaggtgttaatcgtgaattgttactcactgag
caactgcttaactgggaaacagcactgtccacgggtacttactccaccttaccttcgttg
taa
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