Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_1863
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Entry
YpsIP31758_1863 CDS
T00570
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypi03000
]
YpsIP31758_1863
Transcription factors [BR:
ypi03000
]
Prokaryotic type
Helix-turn-helix
Other families
YpsIP31758_1863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_2
AAA_5
HTH_7
Mg_chelatase
HTH_30
AAA
AAA_3
HTH_23
HTH_28
Xre-like-HTH
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
ABS48193
UniProt:
A0A0U1QZG9
LinkDB
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Position
2158560..2160377
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AA seq
605 aa
AA seq
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MQGNLSAVSTPTTACNQRLRDSWLRSQLYGLDRMSDDVPRIEQGELADLLVSHAVLQQFS
QPTVKALAEKIADKQSVVVLADASGLVLNTFGDIQALQKAQQFALTPGNLWSECSRGTNA
IGTALAIDDSCEIYGHQHYLINNQGLYCAAMPLQAPNGQIAGVLDISGPAYHSHPHTLAW
IKNAAKQIEYLWVKQSLHPDQWLMSLHPQIQGIDNIEELLLVFSDNTLMAANRLAMHELA
LGADQFGALTFQQLFPQSKQVANQVPHPLMARNQQRYFFRLRAPARSHFPAIIHVPTTHV
PTTSVTSPDLSFSLRDDDKKMVRLLNAGVSLCINGETGSGKEYVSRALHQQSRWRQGKFV
VINCAAIPESLIESELFGYQPGAFTGASKNGYIGKIREADGGVLFLDEIGDMPLSLQTRL
LRVLQEKEVTPLGSSRSWPVNFAVVCATHRDLPQLVAEGGFREDLLYRLQEFSLTIPPLR
EWPALPAFILQLWRALGGEQRGILFTPALLDTLAKHPWPGNVRQLQSLLKVLFALADDDE
VLDCETLPDNFRGENSEPYPALQQHDKQFIEKTLQYFNGNISKTAKALGIARSTLYRRAA
REKRQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaatttatcagccgtcagcacgcccactacggcgtgcaatcaacgactccgt
gactcttggctgcgtagccaactctacggtttagatcgcatgtctgacgatgttccccgt
attgagcagggagaactggccgacttgctggtcagtcacgccgtattacagcaattttct
cagccaacagtgaaagcgctggctgagaaaattgccgataagcaatcggtagtggtcctc
gccgatgccagtgggttggtattgaataccttcggcgatatacaggctctacaaaaagca
caacagtttgccctgacgcccggtaatctatggagtgaatgcagccgaggaacgaatgcc
attggtactgccctggcgattgatgatagctgcgaaatctatgggcatcagcattatctt
attaacaatcaggggctttactgcgcggctatgccactgcaagcgcctaacggacagatt
gccggtgtgctggatatatcgggtccggcgtatcactcccatccccacacactggcatgg
ataaaaaacgcggcgaaacaaattgagtatttatgggtgaaacagagcctgcatccagat
cagtggctgatgagtctgcatccacaaatacaaggcattgataatattgaagagctacta
ctggtgttctctgataacactctgatggcagctaaccgtctggcgatgcacgagttggcg
ttgggggccgaccagtttggtgccctaaccttccagcaactttttccgcaaagtaagcaa
gttgccaatcaggtgccgcaccctttaatggctcgcaatcaacaacgttatttctttcgc
ctacgggcgccagcacgaagccacttccctgcaataatacacgttcccacaacacacgtt
cccacaacatcggtaacttcgcctgacttatccttctcactgcgcgatgacgataagaaa
atggtgcgattactcaatgctggcgtctcgctttgtataaatggtgagactggcagtggt
aaggagtatgttagccgggctttacatcagcagagccggtggcggcaaggtaagtttgtt
gttatcaactgcgctgccataccagagtctctgattgaatcagaactcttcggataccaa
ccgggtgcatttacgggggccagcaaaaatggctatattggcaaaattcgggaggccgac
ggtggcgtactgtttctggatgaaataggcgatatgccgttatcgctacaaacccgctta
ctccgagtattgcaagaaaaagaggtgacgccgctgggctctagccgtagttggccagtc
aattttgcggtggtctgtgctacgcatcgggatcttccccagttggtcgcggagggcggg
ttccgtgaagacctcctctaccgattgcaagagttctctctaaccattccgccactgcgt
gaatggcccgcgctgcccgcctttattttacagctatggagggcgttgggcggtgagcaa
cggggcattctctttacgccagcactgcttgatacgctggcgaagcatccctggccgggt
aatgtgcgtcaactgcaaagtttactgaaggtattattcgccctggcggatgacgatgag
gttcttgattgcgagacactgcctgacaacttccgaggtgagaatagtgaaccgtacccc
gcgctgcaacagcatgacaagcagtttattgagaaaacactgcaatattttaacggtaac
atcagtaaaactgccaaggctttgggcatagcacgcagtacgctataccgccgtgccgcg
cgagaaaaacgccagtaa
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