Yersinia pseudotuberculosis IP 31758 (serotype O 1b): YpsIP31758_2288
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Entry
YpsIP31758_2288 CDS
T00570
Name
(GenBank) base excision DNA repair protein, HhH-GPD family
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ypi
Yersinia pseudotuberculosis IP 31758 (serotype O:1b)
Pathway
ypi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YpsIP31758_2288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypi03400
]
YpsIP31758_2288
Enzymes [BR:
ypi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
YpsIP31758_2288
DNA repair and recombination proteins [BR:
ypi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YpsIP31758_2288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
CNNM
Motif
Other DBs
NCBI-ProteinID:
ABS49781
LinkDB
All DBs
Position
2592981..2593592
Genome browser
AA seq
203 aa
AA seq
DB search
MFYTYGETEINHLKRRDKKMAAAIERLGMLERPLSPDLFAALIRNIVDQQISVKAAQTVN
TRLTLLLGSITPATVAAASAEAIQRCGMTMRKAGYIKGAADAAINGSLDLSVIAQLPDNE
VITQLSRLDGVGVWTAEMLLISSLSRPDIVSWGDLAIRRGMMNLYRHKTLPRERFERYRR
RYTPYGTTASLYLWALSHKTLED
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgttctatacctacggcgaaacagaaataaatcatctgaaacggcgggataaaaaaatg
gccgcagctattgagcgtttggggatgttagagcgcccattatcgccggacttattcgct
gcattgatcagaaatattgttgatcagcaaatttcagttaaagcggcgcaaaccgttaat
acacgcttaaccctattattgggtagcatcacccccgccaccgttgccgctgcctccgcc
gaggcgattcaacgctgtggtatgaccatgaggaaagcgggctatattaaaggggcggcc
gatgcggccattaatggttcgctggatttatctgttattgcgcaattgcctgataacgag
gttattacacagctttcacgtcttgacggcgtaggggtttggacagcggaaatgctgttg
atctcctcattgtcacggccagatattgtcagttggggagatttagccatccgccgcggc
atgatgaatttatatcgccataaaaccctgccccgtgagcgtttcgagcgctatcgccgc
cgatataccccatacggaacaactgcctctctttatttatgggcgttgtcacacaaaacg
ctggaggattga
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